Propagation of HTCS_Rgu-2 regulog to Bacteroides vulgatus ATCC 8482
| Source regulog: | HTCS_Rgu-2 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides vulgatus ATCC 8482 |
| Orthologous TF(s) | BVU_0149 |
| Regulated genes | 8 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -85
Score: 9.3 Sequence: TGGACGAATTTCCA-(6)-TGTATCTTATTCTA
Locus tag: BVU_0154
|
||||
| BVU_0154 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT2958 | ||||
| Ortholog function: Putative glycosil hydrolase, GH115 family | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00405 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0154 | -85 | 9.3 | TGGACGAATTTCCA-(6)-TGTATCTTATTCTA |
|
Position: -108
Score: 8.9 Sequence: TGAACGAATAAACA-(6)-TGAATGAATTTCTA
Locus tag: BVU_0160
|
||||
| BVU_0160 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaH | ||||
| Ortholog function: Rhamnogalacturonyl hydrolase | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00395 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04972 | -115 | 8.4 | TGAACGAATTTAAA-(6)-TGCACGGAAATCCA |
| Bacteroides plebeius DSM 17135 | BACPLE_03132 | -93 | 8.9 | TGTACAAAAGCACA-(6)-TGTACGATATTCCA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4173 | -117 | 9.2 | TGGACAAATTTAAA-(6)-TGGACAATATTCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_0160 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
|
Position: -87
Score: 9 Sequence: TGAACGAATTTCTA-(6)-TGTATCTTATTCTA
Locus tag: BVU_0162
|
||||
| BVU_0162 | -87 | 9 | TGAACGAATTTCTA-(6)-TGTATCTTATTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT2680 | ||||
| Ortholog function: Beta-galactosidase (EC 3.2.1.23) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00393 | -87 | 9 | TGAACGAATTTCTA-(6)-TGTATCTTATTCTA |
| Bacteroides thetaiotaomicron VPI-5482 | BT2680 | -111 | 7.5 | GATTCATTTTTAAA-(6)-TGAACAAATCTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0162 | -87 | 9 | TGAACGAATTTCTA-(6)-TGTATCTTATTCTA |
|
Position: -88
Score: 9.6 Sequence: TGAACAATATTCCA-(6)-TGAATAAAATTCCA
Locus tag: BVU_0174
|
||||
| BVU_0174 | -88 | 9.6 | TGAACAATATTCCA-(6)-TGAATAAAATTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ramA | ||||
| Ortholog function: Alfa-L-rhamnosidase (EC 3.2.1.40) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00375 | -88 | 9.6 | TGAACAATATTCCA-(6)-TGAATAAAATTCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_0174 | -88 | 9.6 | TGAACAATATTCCA-(6)-TGAATAAAATTCCA |
|
Position: -94
Score: 8.7 Sequence: TGCATAATATTCAA-(6)-TGTACACATTTCCA
Locus tag: BVU_0178
|
||||
| BVU_0178 | -94 | 8.7 | TGCATAATATTCAA-(6)-TGTACACATTTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhiN2 | ||||
| Ortholog function: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00371 | -91 | 8.7 | TGCATAATATTCAA-(6)-TGTACACATTTCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_0178 | -94 | 8.7 | TGCATAATATTCAA-(6)-TGTACACATTTCCA |
|
Position: -94
Score: 9.3 Sequence: TATACGAATTTCCA-(6)-TGTACTTCTTTCTA
Locus tag: BVU_0181
|
||||
| BVU_0181 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bguA | ||||
| Ortholog function: Beta-glucuronidase (EC 3.2.1.31) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00368 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04950 | -141 | 8.2 | TGGACAATATTTCA-(6)-TGTAGTTTTGTACA |
| -83 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA | ||
| Bacteroides plebeius DSM 17135 | BACPLE_00503 | -96 | 8.5 | TACACAATATTCCA-(6)-TGAAGAATTATCGA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4151 | -111 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0181 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA |
|
Position: -91
Score: 7.7 Sequence: TAGAGTATTCAACA-(6)-TGTACAATAATCCA
Locus tag: BVU_1005
|
||||
| BVU_1005 | -91 | 7.7 | TAGAGTATTCAACA-(6)-TGTACAATAATCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: susC_Ara-3 | ||||
| Ortholog function: TonB-dependent outer membrane transporter of arabinan oligosaccharides | ||||
| Bacteroides dorei DSM 17855 | BACDOR_01719 | -118 | 7.7 | TAGAGTATTCAACA-(6)-TGTACAATAATCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_1005 | -91 | 7.7 | TAGAGTATTCAACA-(6)-TGTACAATAATCCA |
|
Position: -69
Score: 9.2 Sequence: TGTATCATTTTTCA-(6)-TGTATGATTTTCCA
Locus tag: BVU_1768
|
||||
| BVU_1768 | -69 | 9.2 | TGTATCATTTTTCA-(6)-TGTATGATTTTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT4156 | ||||
| Ortholog function: Beta-galactosidase, GH2 family | ||||
| Bacteroides dorei DSM 17855 | BACDOR_03323 | -69 | 9.2 | TGTATCATTTTTCA-(6)-TGTATGATTTTCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_1768 | -69 | 9.2 | TGTATCATTTTTCA-(6)-TGTATGATTTTCCA |