Propagation of RocR regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog:	RocR - Bacillales
Regulator type:	Transcription factor
Regulator family:	Fis
Regulation mode:	activator
Biological process:	Arginine degradation; Ornithine degradation
Effector:	Ornithine; L-citrulline
Phylum:	Firmicutes
Propagated regulon:
Target genome	Bacillus pumilus SAFR-032
Orthologous TF(s)	BPUM_3061
Regulated genes	2

Built upon 26 sites [see more]

Predicted regulatory interactions in *Bacillus pumilus SAFR-032*
	Locus tag	Position	Score	Sequence
Position: -137 Score: 7.2 Sequence: TGCAAAGA-(1)-ATTTTGCT Locus tag: BPUM_3060
	BPUM_3060	-137	7.2	TGCAAAGA-(1)-ATTTTGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocD
Ortholog function: Ornithine aminotransferase (EC 2.6.1.13)
Bacillus subtilis subsp. subtilis str. 168	BSU40340	-175	7.9	TGCAAAAG-(1)-ATTTTGCA
Bacillus amyloliquefaciens FZB42	RBAM_037250	-177	8.7	CGCAAAAA-(1)-ATTTTGCG
Bacillus pumilus SAFR-032	BPUM_3060	-137	7.2	TGCAAAGA-(1)-ATTTTGCT
Bacillus licheniformis DSM 13	BLi00422	-142	8.7	CGCAAAAT-(0)-TTTTTGCG
Geobacillus kaustophilus HTA426	GK0188	-168	7.7	TGAAAAAA-(1)-TTTTTGCT
		-93	8.1	TGAAAAAT-(1)-ATTTTGCA
		-37	7.7	CGAAAAAT-(1)-TTTTTGCC
Bacillus halodurans C-125	BH3943	-215	7.3	TGCAAATT-(1)-TTTTTTCG
		-172	8	AGAAAAAT-(1)-ATTTTTCG
Bacillus clausii KSM-K16	ABC0017	-173	8.5	CGCAAAAA-(1)-ATTTTTCG
		-140	7.7	TGCAAAAA-(1)-TTTTTTCT

Position: -89 Score: 7.2 Sequence: AGCAAAAT-(1)-TCTTTGCA Locus tag: BPUM_3061
	BPUM_3061	-89	7.2	AGCAAAAT-(1)-TCTTTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocR
Ortholog function: Transcriptional activator of arginine utilization, Fis family
Bacillus subtilis subsp. subtilis str. 168	BSU40350	-82	7.9	TGCAAAAT-(1)-CTTTTGCA
Bacillus amyloliquefaciens FZB42	RBAM_037260	-59	8.7	CGCAAAAT-(1)-TTTTTGCG
Bacillus pumilus SAFR-032	BPUM_3061	-89	7.2	AGCAAAAT-(1)-TCTTTGCA
Bacillus licheniformis DSM 13	BLi00421	-22	8.7	CGCAAAAA-(0)-ATTTTGCG
Bacillus cereus ATCC 14579	BC0473	-87	8.2	AGCAAAAA-(1)-TTTTTGCG
Bacillus halodurans C-125	BH3944	-116	8	CGAAAAAT-(1)-ATTTTTCT
		-73	7.3	CGAAAAAA-(1)-AATTTGCA
Bacillus clausii KSM-K16	ABC0016	-95	7.7	AGAAAAAA-(1)-TTTTTGCA
		-62	8.5	CGAAAAAT-(1)-TTTTTGCG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of RocR regulog to Bacillus pumilus SAFR-032

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --