Propagation of CymR regulog to Bacillus pumilus SAFR-032
| Source regulog: | CymR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Cysteine metabolism |
| Effector: | O-acetyl-L-serine; CysK, cysteine synthetase |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus pumilus SAFR-032 |
| Orthologous TF(s) | BPUM_2393 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -39
Score: 4.6 Sequence: TTAATACAATAAAATTACTCGGAGATA
Locus tag: BPUM_0057
|
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| BPUM_0057 | -39 | 4.6 | TTAATACAATAAAATTACTCGGAGATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysK | ||||
| Ortholog function: Cysteine synthase (EC 2.5.1.47) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU00730 | -39 | 5.4 | TAATACCAATACAAATAGTCGGAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_000840 | -39 | 5.8 | TAATACCAATAAATTTAGTCGGAAATT |
| Bacillus pumilus SAFR-032 | BPUM_0057 | -40 | 4.6 | TtAaTaCaATaAAATTAcTcGGAgaTA |
| Bacillus licheniformis DSM 13 | BLi00089 | -38 | 5.6 | TAATCCCAATAAAATTACTCGGAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0065 | -30 | 5 | CAAATTCTATAAAAATACTCGGGATTA |
| Geobacillus kaustophilus HTA426 | GK0065 | -38 | 4.7 | CAAAGTCGATAAAATTAATGGGGATTA |
| Bacillus cereus ATCC 14579 | BC0075 | -39 | 5.3 | TAAAACCAATAAAAATACTCGGTGTTA |
| Bacillus halodurans C-125 | BH0088 | -39 | 5.2 | GAAAACCAATAAATTTACTTGGGATTA |
| Bacillus clausii KSM-K16 | ABC0109 | -42 | 4.9 | TAAAACCAATGAAGATACTAGGGATTG |
| Oceanobacillus iheyensis HTE831 | OB0084 | -41 | 6 | TAAATCTTATAAAAATACTTGGAATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_0074 | -44 | 5.7 | AAAAACCAACTAAATTAGTCGGAATAA |
|
Position: -84
Score: 5.5 Sequence: TAAAACCGATTAATTCAATCAGAAAAA
Locus tag: BPUM_0345
|
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| BPUM_0345 | -84 | 5.5 | TAAAACCGATTAATTCAATCAGAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yxeK | ||||
| Ortholog function: Putative monooxygenase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39520 | -82 | 5.6 | TTATTCATATTAAACGACTAGGAATAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_003900 | -85 | 6 | TTATTCTTATAAAATTACTAGGAAATA |
| Bacillus pumilus SAFR-032 | BPUM_0345 | -84 | 5.5 | TAAAACCGATTAATTCAATCAGAAAAA |
|
Position: -89
Score: 5.5 Sequence: TAAATCCTATAAGTAAAGTGTGTTTTA
Locus tag: BPUM_2341
|
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| BPUM_2341 | -89 | 5.5 | TAAATCCTATAAGTAAAGTGTGTTTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydbM | ||||
| Ortholog function: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU04520 | -45 | 6.4 | TAATACATATTAAATTTATCGGAATTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_004850 | -82 | 6 | TAATACTTATTAACTTTATCGGAATTA |
| Bacillus pumilus SAFR-032 | BPUM_2341 | -89 | 5.5 | TAAATCCTATAAGTAAAGTGTGTTTTA |
| -61 | 4.9 | TTATTCCGATTGGAAAAATCAGATATG | ||
| Bacillus licheniformis DSM 13 | BLi00540 | -45 | 5.9 | TAATACTTATTAAATCTATCGGAATTT |
| Oceanobacillus iheyensis HTE831 | OB0293 | -45 | 5.5 | TTATACCTATTGACTTACTAGGCATTA |
|
Position: -51
Score: 5.4 Sequence: TAAAACATACTATACGCATAGGAATAA
Locus tag: BPUM_2363
|
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| BPUM_2363 | -51 | 5.4 | TAAAACATACTATACGCATAGGAATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yrrT | ||||
| Ortholog function: SAM-dependent methyltransferase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27280 | -49 | 6.1 | TAATCCATAGTATACTTATAGGAATTA |
| Bacillus amyloliquefaciens FZB42 | RBAM_024380 | -49 | 5.9 | TAATCCATACTATACTCATAGGAATTA |
| Bacillus pumilus SAFR-032 | BPUM_2363 | -51 | 5.4 | TAAAACATACTATACGCATAGGAATAA |
| Bacillus licheniformis DSM 13 | BLi02856 | -54 | 5.8 | TAAATCATACTATACTTATAGGAATTG |
| Anoxybacillus flavithermus WK1 | Aflv_0758 | -36 | 6.4 | TAATTCATACTATACTTATAGGAATTA |
| Geobacillus kaustophilus HTA426 | GK2543 | -51 | 5.9 | AAAAACATACTATATTTATAGGAATTA |
| Bacillus cereus ATCC 14579 | BC4369 | -29 | 5.1 | TAAAACCGATAAGAAAAAGGGGAATTT |
| Paenibacillus sp. JDR-2 | Pjdr2_5106 | -105 | 5.2 | TAAATCCGATTAATAAGGTTGGAAAAA |