Propagation of KdgR regulog to Parabacteroides johnsonii DSM 18315
| Source regulog: | KdgR - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization; Galacturonate utilization |
| Effector: | 2-keto-3-deoxygluconate |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Parabacteroides johnsonii DSM 18315 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -84
Score: 4.5 Sequence: CGTGTATTCGCACACACA
Locus tag: PRABACTJOHN_00916
|
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| PRABACTJOHN_00916 | -84 | 4.5 | CGTGTATTCGCACACACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hexT | ||||
| Ortholog function: Hexuronate transporter | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_03118 | -170 | 4.6 | TTCGTGTGCGAGAACGAG |
| -154 | 4.7 | AGTGTTTTCGTGCACGAT | ||
| Bacteroides dorei DSM 17855 | BACDOR_03281 | -25 | 4.5 | TTCGTGTGCGAAAACGGT |
| -3 | 4.5 | TTTGTGCACGATAACGAT | ||
| Bacteroides eggerthii DSM 20697 | BACEGG_00860 | -182 | 4.9 | TTCGTGTACGAAAACGAA |
| -160 | 4.1 | TTTGTGCACGATAACGAC | ||
| Bacteroides fragilis NCTC 9343 | BF0809 | -198 | 4.5 | GTCGTGTGCGAAAACGAT |
| -176 | 4.6 | ATTGTGTTCGATAACGAA | ||
| Bacteroides ovatus ATCC 8483 | BACOVA_04896 | -193 | 4.5 | TTCGTGCACGGAAACGAC |
| -171 | 4.3 | TTTGTGCACGCAAACGTC | ||
| Bacteroides plebeius DSM 17135 | BACPLE_00504 | -154 | 4.6 | TCCGTGTGCGTAAACGAA |
| Bacteroides stercoris ATCC 43183 | BACSTE_03308 | -182 | 4.9 | TTCGTGTACGAAAACGAA |
| -160 | 4.1 | TTTGTGCACGATAACGAC | ||
| Bacteroides thetaiotaomicron VPI-5482 | BT4105 | -194 | 4.5 | TTCGTGCACGGAAACGAC |
| -172 | 4.2 | TTTGTGCACGTAAACGTC | ||
| Bacteroides uniformis ATCC 8492 | BACUNI_03603 | -183 | 4.6 | TTCGTGTACGAAAACGAG |
| -161 | 4.1 | TTTGTGCACGATAACGAC | ||
| Bacteroides vulgatus ATCC 8482 | BVU_1794 | -181 | 4.5 | TTCGTGTGCGAAAACGGT |
| -159 | 4.5 | TTTGTGCACGATAACGAT | ||