Propagation of RpoN regulog to Desulfovibrio magneticus RS-1
| Source regulog: | RpoN - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | Sigma54 |
| Regulation mode: | |
| Biological process: | Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism |
| Effector: | |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Desulfovibrio magneticus RS-1 |
| Orthologous TF(s) | DMR_25870 |
| Regulated genes | 51 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -71
Score: 4.9 Sequence: GTTGGCATCCGCCTTGCTC
Locus tag: DMR_03980
|
||||
| DMR_03980 | -71 | 4.9 | GTTGGCATCCGCCTTGCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fliD | ||||
| Ortholog function: Flagellar hook-associated protein FliD | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_2386 | -64 | 4.7 | TCTGGCACCAGGTTTGCTC |
| Desulfovibrio desulfuricans G20 | Dde_1120 | -70 | 4.7 | CATGGCATTTTCCTTGCAT |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0530 | -82 | 4.5 | AGTTGCACGCATTTTGCAA |
| Desulfovibrio magneticus RS-1 | DMR_03980 | -71 | 4.9 | GTTGGCATCCGCCTTGCTC |
| Desulfovibrio salexigens DSM 2638 | Desal_1249 | -67 | 4.9 | TTTGGCATCCTGATTGCAT |
| Desulfovibrio vulgaris Hildenborough | DVU0863 | -71 | 4.2 | CGTGGCATCTGGATTGCAT |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2912 | -73 | 4.7 | TCTGGCACCAGCCTTGCAG |
|
Position: -13
Score: 4.1 Sequence: GTCGGCACAAGGGTTGCAA
Locus tag: DMR_05460
|
||||
| DMR_05460 | -13 | 4.1 | GTCGGCACAAGGGTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU3387 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_1772 | -70 | 4.4 | GCTGGCCCGAAATCTGCTA |
| Desulfovibrio desulfuricans G20 | Dde_0108 | -57 | 4.2 | ATCGGCACTATGGTTGCTA |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0311 | -61 | 4.8 | CTTGGCACTGTACTTGCTG |
| Desulfovibrio magneticus RS-1 | DMR_05460 | -13 | 4.1 | GTCGGCACAAGGGTTGCAA |
| Desulfovibrio salexigens DSM 2638 | Desal_2614 | -59 | 4.3 | GTTGGTACGTTTGCTGCAA |
| Desulfovibrio vulgaris Hildenborough | DVU3387 | -92 | 4.1 | GCAGGTGCGGTTCTTGCTA |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2067 | -67 | 5 | GCTGGCATTCCCCTTGCTT |
| Lawsonia intracellularis PHE/MN1-00 | LI0507 | -62 | 3.9 | TAAGGCCTAAAATTTGCAT |
|
Position: -54
Score: 4.5 Sequence: CCGGGCATCGTCCTTGCAT
Locus tag: DMR_05510
|
||||
| DMR_05510 | -54 | 4.5 | CCGGGCATCGTCCTTGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU1854 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio desulfuricans G20 | Dde_1940 | -79 | 5.1 | TCTGGCATCCATTTTGCTA |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_1230 | -120 | 5.3 | TCTGGCATCCATCTTGCTT |
| Desulfovibrio magneticus RS-1 | DMR_05510 | -54 | 4.5 | CCGGGCATCGTCCTTGCAT |
| Desulfovibrio vulgaris Hildenborough | DVU1854 | 34 | 5 | TTAGGCACGCATATTGCTT |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_0386 | -69 | 5.1 | GCTGGCACCGATCTTGCTC |
|
Position: -209
Score: 4.8 Sequence: CCTGGCATCGTCCCTGCTA
Locus tag: DMR_05720
|
||||
| DMR_05720 | -209 | 4.8 | CCTGGCATCGTCCCTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dcu | ||||
| Ortholog function: anaerobic C4-dicarboxylate transporter | ||||
| Desulfovibrio magneticus RS-1 | DMR_05720 | -209 | 4.8 | CCTGGCATCGTCCCTGCTA |
|
Position: -259
Score: 4.1 Sequence: TTGGGCACGGGTCTTGAAG
Locus tag: DMR_06700
|
||||
| DMR_06700 | -259 | 4.1 | TTGGGCACGGGTCTTGAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DMR_06700 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio magneticus RS-1 | DMR_06700 | -259 | 4.1 | TTGGGCACGGGTCTTGAAG |
|
Position: -161
Score: 3.8 Sequence: TTAGGTATGTAAATTGCTA
Locus tag: DMR_10270
|
||||
| DMR_10270 | -161 | 3.8 | TTAGGTATGTAAATTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fliC | ||||
| Ortholog function: flagellin domain protein | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_2385 | -64 | 3.8 | CAAGGCCCGCAAACTGCTC |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_1028 | -58 | 4.6 | TTTGGCACATGGATTGCAA |
| Desulfovibrio magneticus RS-1 | DMR_10270 | -161 | 3.8 | TTAGGTATGTAAATTGCTA |
|
Position: -29
Score: 4.9 Sequence: TCTGGACCGGTATTTGCTT
Locus tag: DMR_11080
|
||||
| DMR_11080 | -29 | 4.9 | TCTGGACCGGTATTTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Dbac_0547 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_0547 | -44 | 4.8 | TCTGGCATGGGATCTGCTT |
| Desulfovibrio magneticus RS-1 | DMR_11080 | -29 | 4.9 | TCTGGACCGGTATTTGCTT |
| Desulfovibrio salexigens DSM 2638 | Desal_0449 | -58 | 4.5 | TTTGGCATCAATAATGCTT |
|
Position: -42
Score: 4.9 Sequence: TTCGGCACGGTTCCTGCCT
Locus tag: DMR_11290
|
||||
| DMR_11290 | -42 | 4.9 | TTCGGCACGGTTCCTGCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU2107 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfohalobium retbaense DSM 5692 | Dret_0446 | -67 | 4.8 | ATCGGCACGGACATTGCTA |
| Desulfomicrobium baculatum DSM 4028 | Dbac_2301 | -43 | 4.7 | GGCGGCACGGCTCATGCTT |
| Desulfovibrio desulfuricans G20 | Dde_3197 | -49 | 4.2 | GTCGGCATCATTCCTGCCT |
| Desulfovibrio magneticus RS-1 | DMR_11290 | -42 | 4.9 | TTCGGCACGGTTCCTGCCT |
| Desulfovibrio salexigens DSM 2638 | Desal_0622 | -30 | 4.7 | CATGGCACGGACTATGCCT |
| Desulfovibrio vulgaris Hildenborough | DVU2107 | -51 | 4.4 | CACGGCATCATTCCTGCTT |
|
Position: -43
Score: 4.4 Sequence: TTTGGAACGGGTCTTGAAG
Locus tag: DMR_13730
|
||||
| DMR_13730 | -43 | 4.4 | TTTGGAACGGGTCTTGAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fliK | ||||
| Ortholog function: Flagellar hook-length control protein FliK | ||||
| Desulfovibrio magneticus RS-1 | DMR_13730 | -43 | 4.4 | TTTGGAACGGGTCTTGAAG |
| Desulfovibrio salexigens DSM 2638 | Desal_3007 | -43 | 4.7 | TTTGGCACGCCTCGTGAAT |
|
Position: -70
Score: 5.2 Sequence: TTTGGAACGCCTCCTGCTT
Locus tag: DMR_13760
|
||||
| DMR_13760 | -70 | 5.2 | TTTGGAACGCCTCCTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fliC | ||||
| Ortholog function: flagellin | ||||
| Desulfovibrio magneticus RS-1 | DMR_13760 | -70 | 5.2 | TTTGGAACGCCTCCTGCTT |
|
Position: -180
Score: 4.2 Sequence: ATTGGCCCAGCATGTGCAA
Locus tag: DMR_16470
|
||||
| DMR_16470 | -180 | 4.2 | ATTGGCCCAGCATGTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: flgE | ||||
| Ortholog function: Flagellar hook protein FlgE | ||||
| Desulfovibrio magneticus RS-1 | DMR_16470 | -180 | 4.2 | ATTGGCCCAGCATGTGCAA |
|
Position: -62
Score: 4.9 Sequence: TCTGGCACGCTCCTTGTAG
Locus tag: DMR_17520
|
||||
| DMR_17520 | -62 | 4.9 | TCTGGCACGCTCCTTGTAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifE | ||||
| Ortholog function: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_0841 | -81 | 5.1 | TTTGGCACGCCCGTTGCCC |
| Desulfovibrio magneticus RS-1 | DMR_17520 | -62 | 4.9 | TCTGGCACGCTCCTTGTAG |
| Desulfovibrio salexigens DSM 2638 | Desal_0439 | -69 | 5.1 | TTTGGCACACCACTTGCCT |
| Desulfovibrio vulgaris Hildenborough | DVUA0009 | -326 | 4.7 | CATGGCACATCCCTTGCCC |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2620 | -110 | 4.8 | ACTGGCACGGGGTTTGCCC |
|
Position: -114
Score: 4.1 Sequence: TTTGGAACGGGGGATGCAG
Locus tag: DMR_19620
|
||||
| DMR_19620 | -114 | 4.1 | TTTGGAACGGGGGATGCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: zraS | ||||
| Ortholog function: Sensor protein of sigma-54-dependent two-component system | ||||
| Desulfovibrio desulfuricans G20 | Dde_0110 | -208 | 4.3 | TCTGGTGCGTTGCTTGCAT |
| Desulfovibrio magneticus RS-1 | DMR_19620 | -114 | 4.1 | TTTGGAACGGGGGATGCAG |
|
Position: -84
Score: 4.4 Sequence: GATGGCACACGACTTGCGA
Locus tag: DMR_20070
|
||||
| DMR_20070 | -84 | 4.4 | GATGGCACACGACTTGCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: por | ||||
| Ortholog function: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) | ||||
| Desulfovibrio magneticus RS-1 | DMR_20070 | -84 | 4.4 | GATGGCACACGACTTGCGA |
|
Position: -60
Score: 5 Sequence: ACTGGCATGACTCTTGCCT
Locus tag: DMR_20560
|
||||
| DMR_20560 | -60 | 5 | ACTGGCATGACTCTTGCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nifH | ||||
| Ortholog function: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_0834 | -81 | 5.1 | TTTGGCACGCCCGTTGCCC |
| Desulfovibrio magneticus RS-1 | DMR_20560 | -60 | 5 | ACTGGCATGACTCTTGCCT |
| Desulfovibrio salexigens DSM 2638 | Desal_0447 | -69 | 5.1 | TTTGGCACACCACTTGCCT |
| Desulfovibrio vulgaris Hildenborough | DVUA0015 | -326 | 4.7 | CATGGCACATCCCTTGCCC |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2613 | -110 | 4.8 | ACTGGCACGGGGTTTGCCC |
|
Position: -60
Score: 4.2 Sequence: GTTGGCATGACAATTGATA
Locus tag: DMR_22570
|
||||
| DMR_22570 | -60 | 4.2 | GTTGGCATGACAATTGATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DMR_22570 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio magneticus RS-1 | DMR_22570 | -60 | 4.2 | GTTGGCATGACAATTGATA |
|
Position: -29
Score: 4.6 Sequence: CTTGGTCCAGCTTTTGCTA
Locus tag: DMR_23860
|
||||
| DMR_23860 | -29 | 4.6 | CTTGGTCCAGCTTTTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fliR | ||||
| Ortholog function: Flagellar biosynthesis protein FliR | ||||
| Desulfohalobium retbaense DSM 5692 | Dret_0586 | -51 | 4.5 | GCTGGCATAATTTATGCTA |
| Desulfomicrobium baculatum DSM 4028 | Dbac_3473 | -30 | 4.7 | TCTGGTCCGCGTTTTGCTG |
| Desulfovibrio desulfuricans G20 | Dde_0378 | -30 | 4.6 | GATGGTCTGTTTTTTGCTT |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0193 | -29 | 4.7 | TTTGGCAACCATTTTGCAA |
| Desulfovibrio magneticus RS-1 | DMR_23860 | -29 | 4.6 | CTTGGTCCAGCTTTTGCTA |
| Desulfovibrio salexigens DSM 2638 | Desal_2592 | -41 | 3.4 | ATGGGTCCTGATTTTGCAG |
| Desulfovibrio vulgaris Hildenborough | DVU3234 | -29 | 4.8 | CGTGGCCCGTATTTTGCTC |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2016 | -29 | 5.1 | CATGGCCCGCATCTTGCTG |
|
Position: -89
Score: 5 Sequence: CTTGGCAGGCTCTTTGCTA
Locus tag: DMR_25570
|
||||
| DMR_25570 | -89 | 5 | CTTGGCAGGCTCTTTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU3020 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio desulfuricans G20 | Dde_3230 | -95 | 4.4 | AATGGCAGAACCTTTGCAT |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0695 | -76 | 4.9 | TTTGGCAAGACCTTTGCAT |
| Desulfovibrio magneticus RS-1 | DMR_25570 | -89 | 5 | CTTGGCAGGCTCTTTGCTA |
| Desulfovibrio vulgaris Hildenborough | DVU3020 | -56 | 5.1 | CATGGCATGTGCCTTGCTT |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_1856 | -71 | 4.7 | CTCGGCAAGGCTCTTGCAT |
| Lawsonia intracellularis PHE/MN1-00 | LI0277 | -57 | 4.4 | TTAGGCATAGTTTTTGATT |
|
Position: -78
Score: 4.9 Sequence: TTTGGCACGGTTGTTGTAA
Locus tag: DMR_25590
|
||||
| DMR_25590 | -78 | 4.9 | TTTGGCACGGTTGTTGTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU0410 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0313 | -75 | 4.9 | AATGGCATACAGTTTGCTT |
| Desulfovibrio magneticus RS-1 | DMR_25590 | -78 | 4.9 | TTTGGCACGGTTGTTGTAA |
| Desulfovibrio salexigens DSM 2638 | Desal_2827 | -81 | 4.8 | GTTGGCATGACTCTTGTAT |
| Desulfovibrio vulgaris Hildenborough | DVU0410 | -70 | 5.1 | GTTGGCCCGGAATTTGCTT |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_1546 | -75 | 4.8 | CATGGTCCGTTTCTTGCTT |
|
Position: -71
Score: 4.7 Sequence: ACTGGCCCGCAATTTGCCT
Locus tag: DMR_31520
|
||||
| DMR_31520 | -71 | 4.7 | ACTGGCCCGCAATTTGCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: flgJ | ||||
| Ortholog function: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) | ||||
| Desulfovibrio desulfuricans G20 | Dde_3154 | -66 | 4.9 | GCTGGCCCGCATGTTGCAT |
| Desulfovibrio magneticus RS-1 | DMR_31520 | -71 | 4.7 | ACTGGCCCGCAATTTGCCT |
| Desulfovibrio vulgaris Hildenborough | DVU0517 | -68 | 4.1 | CGTGGTCTGCATATTGCAA |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2522 | -220 | 4.4 | ACTGGCACGGTGTTGGCAA |
| -150 | 3.8 | TGCGGAATGCTTGTTTCTT | ||
|
Position: -46
Score: 4.8 Sequence: GCTGGCCCGCATGTTGCAA
Locus tag: DMR_31570
|
||||
| DMR_31570 | -46 | 4.8 | GCTGGCCCGCATGTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: flgF | ||||
| Ortholog function: Flagellar basal-body rod protein FlgF | ||||
| Desulfohalobium retbaense DSM 5692 | Dret_0593 | -92 | 4.2 | GACGGAACGGTATTTGCCC |
| Desulfomicrobium baculatum DSM 4028 | Dbac_2410 | -46 | 4.8 | ACTGGCCTGGTATTTGCTC |
| Desulfovibrio desulfuricans G20 | Dde_3159 | -66 | 4.9 | GCTGGCCCGCATGTTGCAT |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0391 | -101 | 5.3 | TTTGGCCCGCACTTTGCAT |
| Desulfovibrio magneticus RS-1 | DMR_31570 | -46 | 4.8 | GCTGGCCCGCATGTTGCAA |
| Desulfovibrio salexigens DSM 2638 | Desal_1008 | -71 | 5 | TTTGGCCTGCACTTTGCAA |
| Desulfovibrio vulgaris Hildenborough | DVU0512 | -68 | 4.1 | CGTGGTCTGCATATTGCAA |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2517 | -58 | 4.5 | TGTGGCCCATGCCTTGCAA |
| Lawsonia intracellularis PHE/MN1-00 | LI0740 | -147 | 4.6 | CTTGGTATAACTTTTGCTA |
|
Position: 0
Score: 3.8 Sequence: ATGAGCATGGTCCTTGCAA
Locus tag: DMR_31680
|
||||
| DMR_31680 | 0 | 3.8 | ATGAGCATGGTCCTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU2896 | ||||
| Ortholog function: Tetratricopeptide domain protein | ||||
| Desulfovibrio salexigens DSM 2638 | Desal_2983 | -73 | 3.9 | GTAGGCAGGAATATTGCAA |
|
Position: -52
Score: 4.9 Sequence: TTTGGCCCCGCCTTTGCAA
Locus tag: DMR_33160
|
||||
| DMR_33160 | -52 | 4.9 | TTTGGCCCCGCCTTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU0542 | ||||
| Ortholog function: putative universal stress protein | ||||
| Desulfovibrio magneticus RS-1 | DMR_33160 | -52 | 4.9 | TTTGGCCCCGCCTTTGCAA |
| Desulfovibrio vulgaris Hildenborough | DVU0542 | -71 | 5.1 | CGTGGCATGCAGCTTGCTT |
|
Position: -104
Score: 5.1 Sequence: TTTGGCACGTTCCCTGCTG
Locus tag: DMR_33620
|
||||
| DMR_33620 | -104 | 5.1 | TTTGGCACGTTCCCTGCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU3144 | ||||
| Ortholog function: cytochrome c family protein | ||||
| Desulfohalobium retbaense DSM 5692 | Dret_0167 | -228 | 4.1 | TCAGGCATATAAATTGCTT |
| Desulfovibrio magneticus RS-1 | DMR_33620 | -104 | 5.1 | TTTGGCACGTTCCCTGCTG |
| Desulfovibrio salexigens DSM 2638 | Desal_0831 | -80 | 4.3 | GTAGGTACGGATTCTGCTT |
| Desulfovibrio vulgaris Hildenborough | DVU3144 | -68 | 4.5 | TCAGGCACAGTTCCTGCTC |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_1694 | -95 | 4.5 | CCGGGCATGCTTCCTGCTC |
|
Position: -246
Score: 5.1 Sequence: CTTGGCAGGCTTCTTGCTC
Locus tag: DMR_33860
|
||||
| DMR_33860 | -246 | 5.1 | CTTGGCAGGCTTCTTGCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cpaB | ||||
| Ortholog function: Flp pilus assembly protein CpaB | ||||
| Desulfovibrio desulfuricans G20 | Dde_2359 | -82 | 5.1 | CTTGGCACGGTGGTTGCCT |
| Desulfovibrio magneticus RS-1 | DMR_33860 | -246 | 5.1 | CTTGGCAGGCTTCTTGCTC |
| Desulfovibrio vulgaris Hildenborough | DVU2118 | -78 | 4.7 | TTTGGCATGAGGGTTGCTC |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2742 | -79 | 4.9 | CTTGGCACGCGGGTTGCTG |
|
Position: -179
Score: 5.2 Sequence: ATTGGCACACTCTTTGCCT
Locus tag: DMR_34260
|
||||
| DMR_34260 | -179 | 5.2 | ATTGGCACACTCTTTGCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: C4-dicarboxylic acid transport protein | ||||
| Desulfovibrio magneticus RS-1 | DMR_34260 | -179 | 5.2 | ATTGGCACACTCTTTGCCT |
| Desulfovibrio magneticus RS-1 | DMR_05750 | -209 | 4.8 | CCTGGCATCGTCCCTGCTA |
|
Position: -101
Score: 5 Sequence: CATGGCACGGATGCTGCTT
Locus tag: DMR_37280
|
||||
| DMR_37280 | -101 | 5 | CATGGCACGGATGCTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: zraP | ||||
| Ortholog function: Zinc resistance-associated protein | ||||
| Desulfovibrio magneticus RS-1 | DMR_45210 | -101 | 4.9 | GTTGGCACGGCTGCTGCAA |
| Desulfovibrio magneticus RS-1 | DMR_37280 | -101 | 5 | CATGGCACGGATGCTGCTT |
|
Position: -60
Score: 5.4 Sequence: TCTGGCACGCTCCCTGCTT
Locus tag: DMR_38330
|
||||
| DMR_38330 | -60 | 5.4 | TCTGGCACGCTCCCTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pspA | ||||
| Ortholog function: Phage shock protein A | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_1225 | -61 | 4.7 | ACTGGCATGATCTCTGCTC |
| Desulfovibrio desulfuricans G20 | Dde_3226 | -49 | 4.4 | TCTGGCATAGAAGGTGCTT |
| Desulfovibrio magneticus RS-1 | DMR_38330 | -60 | 5.4 | TCTGGCACGCTCCCTGCTT |
| Desulfovibrio vulgaris Hildenborough | DVU2988 | -46 | 4.7 | CCCGGCACGCTTCGTGCTG |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_1799 | -60 | 5.1 | GCTGGCACGGTTGCTGCTT |
|
Position: -52
Score: 5.1 Sequence: TCTGGCAGGTTTTTTGCTT
Locus tag: DMR_39260
|
||||
| DMR_39260 | -52 | 5.1 | TCTGGCAGGTTTTTTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU1032 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_2476 | -47 | 5 | CTTGGCAGGGACTTTGCTT |
| Desulfovibrio desulfuricans G20 | Dde_1455 | -54 | 4.7 | GTTGGCAGACTTATTGCTA |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0763 | -59 | 4.6 | CTTGGCAGCATTTTTGCAT |
| Desulfovibrio magneticus RS-1 | DMR_39260 | -52 | 5.1 | TCTGGCAGGTTTTTTGCTT |
| Desulfovibrio salexigens DSM 2638 | Desal_0181 | -54 | 5 | TTTGGCAAGGTCATTGCAT |
| Desulfovibrio vulgaris Hildenborough | DVU1032 | -52 | 4.8 | GGTGGCGTGCTTCTTGCTC |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_0905 | -38 | 5.1 | CATGGCAGGGTTCTTGCTT |
| Lawsonia intracellularis PHE/MN1-00 | LI0887 | -53 | 5.3 | CTTGGCAAGCTTTTTGCTT |
|
Position: -132
Score: 3.9 Sequence: AAAGGCACAATCCTTGATA
Locus tag: DMR_40120
|
||||
| DMR_40120 | -132 | 3.9 | AAAGGCACAATCCTTGATA | |
| Supported by regulated orthologs from reference regulons | ||||