Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RpoN regulog to Desulfovibrio salexigens DSM 2638

Reference regulog properties
Source regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Propagated regulon:
Target genome Desulfovibrio salexigens DSM 2638
Orthologous TF(s) Desal_2255
Regulated genes 51
Built upon 487 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Desulfovibrio salexigens DSM 2638
Locus tag Position Score Sequence
Position: -54
Score: 5
Sequence: TTTGGCAAGGTCATTGCAT
Locus tag: Desal_0181
Desal_0181 -54 5 TTTGGCAAGGTCATTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1032
Ortholog function: hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_2476 -47 5 CTTGGCAGGGACTTTGCTT
Desulfovibrio desulfuricans G20 Dde_1455 -54 4.7 GTTGGCAGACTTATTGCTA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0763 -59 4.6 CTTGGCAGCATTTTTGCAT
Desulfovibrio magneticus RS-1 DMR_39260 -52 5.1 TCTGGCAGGTTTTTTGCTT
Desulfovibrio salexigens DSM 2638 Desal_0181 -54 5 TTTGGCAAGGTCATTGCAT
Desulfovibrio vulgaris Hildenborough DVU1032 -52 4.8 GGTGGCGTGCTTCTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0905 -38 5.1 CATGGCAGGGTTCTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0887 -53 5.3 CTTGGCAAGCTTTTTGCTT
Position: -92
Score: 5
Sequence: TTTGGCACACGTCTTGCCC
Locus tag: Desal_0284
Desal_0284 -92 5 TTTGGCACACGTCTTGCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adh
Ortholog function: alcohol dehydrogenase, iron-containing( EC:1.1.1.1 )
Desulfovibrio desulfuricans G20 Dde_3523 -98 5.1 TTTGGCCCGTTCCTTGCCT
Desulfovibrio salexigens DSM 2638 Desal_0284 -92 5 TTTGGCACACGTCTTGCCC
Position: -20
Score: 4.8
Sequence: TATGGCATGTCTTATGCTA
Locus tag: Desal_0361
Desal_0361 -20 4.8 TATGGCATGTCTTATGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Desal_0361
Ortholog function: Formate dehydrogenase, alpha subunit
Desulfovibrio salexigens DSM 2638 Desal_0361 -20 4.8 TATGGCATGTCTTATGCTA
Position: -87
Score: 5.2
Sequence: TCTGGCCCGCCTTTTGCCT
Locus tag: Desal_0416
Desal_0416 -87 5.2 TCTGGCCCGCCTTTTGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0943
Ortholog function: membrane protein, putative
Desulfohalobium retbaense DSM 5692 Dret_1220 -147 4.6 TTTGGTTTGCTTTTTGCTT
Desulfomicrobium baculatum DSM 4028 Dbac_2656 -84 4.9 TGTGGCAGGTCTTTTGCTT
Desulfovibrio desulfuricans G20 Dde_0876 -116 5.2 TCTGGCACGCTTCTTGTTA
Desulfovibrio salexigens DSM 2638 Desal_0416 -87 5.2 TCTGGCCCGCCTTTTGCCT
Desulfovibrio vulgaris Hildenborough DVU0943 -73 5.2 TCTGGCACGCTTCTTGTTC
Desulfovibrio vulgaris Hildenborough DVU2133 -73 4.9 CATTGCACGCTTCTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_1363 -85 5.3 TTTGGCACGCCTCTTGATT
Position: -69
Score: 5.1
Sequence: TTTGGCACACCACTTGCCT
Locus tag: Desal_0447
Desal_0447 -69 5.1 TTTGGCACACCACTTGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifH
Ortholog function: Nitrogenase (molybdenum-iron) reductase and maturation protein NifH
Desulfomicrobium baculatum DSM 4028 Dbac_0834 -81 5.1 TTTGGCACGCCCGTTGCCC
Desulfovibrio magneticus RS-1 DMR_20560 -60 5 ACTGGCATGACTCTTGCCT
Desulfovibrio salexigens DSM 2638 Desal_0447 -69 5.1 TTTGGCACACCACTTGCCT
Desulfovibrio vulgaris Hildenborough DVUA0015 -326 4.7 CATGGCACATCCCTTGCCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2613 -110 4.8 ACTGGCACGGGGTTTGCCC
Position: -58
Score: 4.5
Sequence: TTTGGCATCAATAATGCTT
Locus tag: Desal_0448
Desal_0448 -58 4.5 TTTGGCATCAATAATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifV
Ortholog function: Pyruvate carboxyltransferase
Desulfomicrobium baculatum DSM 4028 Dbac_0833 -57 4.2 CGTGGCATCGACCATGCAA
Desulfovibrio salexigens DSM 2638 Desal_0448 -58 4.5 TTTGGCATCAATAATGCTT
Desulfovibrio vulgaris Hildenborough DVUA0016 26 4.3 CTTGGCATCGGGTCTGCAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2612 -117 4.2 GTTGGCATCGGCGATGCAT
Position: -29
Score: 4.8
Sequence: GCTGGCACTTACTTTGCTT
Locus tag: Desal_0518
Desal_0518 -29 4.8 GCTGGCACTTACTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifA-2
Ortholog function: transcriptional regulator, NifA subfamily, Fis Family
Desulfovibrio salexigens DSM 2638 Desal_0518 -29 4.8 GCTGGCACTTACTTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2528 -29 4 GGCGGAACCATCCTTGCAA
Position: -97
Score: 4.3
Sequence: TTTGGCACCCAAATTGAAT
Locus tag: Desal_0581
Desal_0581 -97 4.3 TTTGGCACCCAAATTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_0439
Ortholog function: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (EC 2.7.8.12)
Desulfovibrio desulfuricans G20 Dde_0439 -73 5.1 CGTGGCATGCAACTTGCTT
Desulfovibrio salexigens DSM 2638 Desal_0581 -97 4.3 TTTGGCACCCAAATTGAAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1840 -253 4.4 GCTTGCACACTACTTGCAT
Position: -30
Score: 4.7
Sequence: CATGGCACGGACTATGCCT
Locus tag: Desal_0622
Desal_0622 -30 4.7 CATGGCACGGACTATGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2107
Ortholog function: hypothetical protein
Desulfohalobium retbaense DSM 5692 Dret_0446 -67 4.8 ATCGGCACGGACATTGCTA
Desulfomicrobium baculatum DSM 4028 Dbac_2301 -43 4.7 GGCGGCACGGCTCATGCTT
Desulfovibrio desulfuricans G20 Dde_3197 -49 4.2 GTCGGCATCATTCCTGCCT
Desulfovibrio magneticus RS-1 DMR_11290 -42 4.9 TTCGGCACGGTTCCTGCCT
Desulfovibrio salexigens DSM 2638 Desal_0622 -30 4.7 CATGGCACGGACTATGCCT
Desulfovibrio vulgaris Hildenborough DVU2107 -51 4.4 CACGGCATCATTCCTGCTT
Position: -67
Score: 4.9
Sequence: TTTGGCACAGCACGTGCTT
Locus tag: Desal_0680
Desal_0680 -67 4.9 TTTGGCACAGCACGTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: zraP
Ortholog function: Zinc resistance-associated protein
Desulfovibrio salexigens DSM 2638 Desal_0680 -67 4.9 TTTGGCACAGCACGTGCTT
Desulfovibrio salexigens DSM 2638 Desal_0681 -67 5.2 TTTGGCACGGGCCATGCTT
Position: -67
Score: 5.2
Sequence: TTTGGCACGGGCCATGCTT
Locus tag: Desal_0681
Desal_0681 -67 5.2 TTTGGCACGGGCCATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: zraP
Ortholog function: Zinc resistance-associated protein
Desulfovibrio salexigens DSM 2638 Desal_0680 -67 4.9 TTTGGCACAGCACGTGCTT
Desulfovibrio salexigens DSM 2638 Desal_0681 -67 5.2 TTTGGCACGGGCCATGCTT
Position: -80
Score: 4.3
Sequence: GTAGGTACGGATTCTGCTT
Locus tag: Desal_0829
Desal_0829 -80 4.3 GTAGGTACGGATTCTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_0657
Ortholog function: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Desulfohalobium retbaense DSM 5692 Dret_0164 -82 4.6 ATCGGAACGGATATTGCTT
Desulfovibrio desulfuricans G20 Dde_0657 -83 4.6 ACCGGCACGGTTTGTGCTG
Desulfovibrio salexigens DSM 2638 Desal_0829 -80 4.3 GTAGGTACGGATTCTGCTT
Position: -71
Score: 5
Sequence: TTTGGCCTGCACTTTGCAA
Locus tag: Desal_1008
Desal_1008 -71 5 TTTGGCCTGCACTTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgF
Ortholog function: Flagellar basal-body rod protein FlgF
Desulfohalobium retbaense DSM 5692 Dret_0593 -92 4.2 GACGGAACGGTATTTGCCC
Desulfomicrobium baculatum DSM 4028 Dbac_2410 -46 4.8 ACTGGCCTGGTATTTGCTC
Desulfovibrio desulfuricans G20 Dde_3159 -66 4.9 GCTGGCCCGCATGTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0391 -101 5.3 TTTGGCCCGCACTTTGCAT
Desulfovibrio magneticus RS-1 DMR_31570 -46 4.8 GCTGGCCCGCATGTTGCAA
Desulfovibrio salexigens DSM 2638 Desal_1008 -71 5 TTTGGCCTGCACTTTGCAA
Desulfovibrio vulgaris Hildenborough DVU0512 -68 4.1 CGTGGTCTGCATATTGCAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2517 -58 4.5 TGTGGCCCATGCCTTGCAA
Lawsonia intracellularis PHE/MN1-00 LI0740 -147 4.6 CTTGGTATAACTTTTGCTA
Position: -87
Score: 4.3
Sequence: GACGGTATGCAATTTGCTT
Locus tag: Desal_1014
Desal_1014 -87 4.3 GACGGTATGCAATTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgJ
Ortholog function: Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
Desulfohalobium retbaense DSM 5692 Dret_0598 -92 4.2 GACGGAACGGTATTTGCCC
Desulfomicrobium baculatum DSM 4028 Dbac_2405 -46 4.8 ACTGGCCTGGTATTTGCTC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2003 -57 4.9 TTCGGCACGCTTTCTGCAA
Desulfovibrio salexigens DSM 2638 Desal_1014 -87 4.3 GACGGTATGCAATTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0745 -147 4.6 CTTGGTATAACTTTTGCTA
Position: -50
Score: 4.8
Sequence: AATGGCCCACCATTTGCTT
Locus tag: Desal_1153
Desal_1153 -50 4.8 AATGGCCCACCATTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliF
Ortholog function: Flagellar M-ring protein FliF
Desulfohalobium retbaense DSM 5692 Dret_0569 -290 4.5 ATTGGAGCACTTTTTGCTC
-130 4.7 TATGGCGTGGTATTTGCAT
Desulfomicrobium baculatum DSM 4028 Dbac_3029 -91 4.7 TCTGGAATGGTCATTGCAA
Desulfovibrio desulfuricans G20 Dde_0353 -75 4.9 CATGGAACACACCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1573 -79 4.5 TTAGGCATGAATGTTGCTA
Desulfovibrio magneticus RS-1 DMR_45050 -82 4.9 GCTGGAACGCTTTTTGCCC
Desulfovibrio salexigens DSM 2638 Desal_1153 -50 4.8 AATGGCCCACCATTTGCTT
Desulfovibrio vulgaris Hildenborough DVU0313 -91 4.9 CGTGGAACCCTTTTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0857 -68 5 TATGGCATATGTTTTGCTT
Position: -240
Score: 3.5
Sequence: TAATGCACACCCCGTGCCA
Position: -96
Score: 4.9
Sequence: AATGGAACACCTTTTGCTA
Locus tag: Desal_1156
Desal_1156 -240 3.5 TAATGCACACCCCGTGCCA
-96 4.9 AATGGAACACCTTTTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgB
Ortholog function: Flagellar basal-body rod protein FlgB
Desulfohalobium retbaense DSM 5692 Dret_0653 -159 3.5 TAGGGCTCAGGTGTTGCCT
Desulfomicrobium baculatum DSM 4028 Dbac_3026 -91 4.7 TCTGGAATGGTCATTGCAA
Desulfovibrio desulfuricans G20 Dde_0356 -75 4.9 CATGGAACACACCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1576 -59 4.8 TTTGGAACAAATGTTGCTT
Desulfovibrio magneticus RS-1 DMR_45020 -82 4.9 GCTGGAACGCTTTTTGCCC
Desulfovibrio salexigens DSM 2638 Desal_1156 -96 4.9 AATGGAACACCTTTTGCTA
Desulfovibrio vulgaris Hildenborough DVU0316 -91 4.9 CGTGGAACCCTTTTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2284 -106 4.8 GCTGGAACACCTCTTGCTG
Lawsonia intracellularis PHE/MN1-00 LI0860 -68 5 TATGGCATATGTTTTGCTT
Position: -100
Score: 4.9
Sequence: TTTGGCACGGGGTGTGCAT
Locus tag: Desal_1157
Desal_1157 -100 4.9 TTTGGCACGGGGTGTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0318
Ortholog function: TPR repeat-containing protein
Desulfovibrio salexigens DSM 2638 Desal_1157 -100 4.9 TTTGGCACGGGGTGTGCAT
Position: -38
Score: 4.6
Sequence: TACGGCACAAATATTGCTT
Locus tag: Desal_1243
Desal_1243 -38 4.6 TACGGCACAAATATTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0858
Ortholog function: lipoprotein, putative
Desulfomicrobium baculatum DSM 4028 Dbac_0245 -46 4.6 CTTGGTATCTATCTTGCTT
Desulfovibrio desulfuricans G20 Dde_2573 -132 4.2 CATGGCCCTTCTTTTGCCG
-65 4.3 CACGGCACTCAATTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0596 -177 4.9 TTTGGCACGTTTCTGGCAT
-148 4.3 AATGGCACACACTGTGCCG
-54 4 GTTGGCAAGGTGAATGCCA
Desulfovibrio salexigens DSM 2638 Desal_1243 -38 4.6 TACGGCACAAATATTGCTT
Desulfovibrio vulgaris Hildenborough DVU0858 -79 5 TCCGGCATCGTTCTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2906 -127 4.7 TACGGCACCATTCTTGCTG
Position: -67
Score: 4.9
Sequence: TTTGGCATCCTGATTGCAT
Locus tag: Desal_1249
Desal_1249 -67 4.9 TTTGGCATCCTGATTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliD
Ortholog function: Flagellar hook-associated protein FliD
Desulfomicrobium baculatum DSM 4028 Dbac_2386 -64 4.7 TCTGGCACCAGGTTTGCTC
Desulfovibrio desulfuricans G20 Dde_1120 -70 4.7 CATGGCATTTTCCTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0530 -82 4.5 AGTTGCACGCATTTTGCAA
Desulfovibrio magneticus RS-1 DMR_03980 -71 4.9 GTTGGCATCCGCCTTGCTC
Desulfovibrio salexigens DSM 2638 Desal_1249 -67 4.9 TTTGGCATCCTGATTGCAT
Desulfovibrio vulgaris Hildenborough DVU0863 -71 4.2 CGTGGCATCTGGATTGCAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2912 -73 4.7 TCTGGCACCAGCCTTGCAG
Position: -51
Score: 5.1
Sequence: TTTGGCACCCCTTATGCTT
Locus tag: Desal_1330
Desal_1330 -51 5.1 TTTGGCACCCCTTATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0617
Ortholog function: hypothetical protein
Desulfovibrio salexigens DSM 2638 Desal_1330 -51 5.1 TTTGGCACCCCTTATGCTT
Desulfovibrio vulgaris Hildenborough DVU0617 -60 4.8 TCTGGCCCGTTTCCTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_1509 -29 4 TATGGCGCGGAAAGTGCTG
Position: -282
Score: 3.4
Sequence: GCTGGCACAATTTGTACCG
Position: -192
Score: 3.7
Sequence: GCTTGAATAAGCTTTGCAT
Position: -181
Score: 3.3
Sequence: CTTTGCATACCTGTTTTTT
Position: -88
Score: 5
Sequence: TGTGGCACAGCGTTTGCTC
Position: -13
Score: 3.3
Sequence: AATGGAAACGAATATGCAG
Locus tag: Desal_2196
Desal_2196 -282 3.4 GCTGGCACAATTTGTACCG
-192 3.7 GCTTGAATAAGCTTTGCAT
-181 3.3 CTTTGCATACCTGTTTTTT
-88 5 TGTGGCACAGCGTTTGCTC
-13 3.3 AATGGAAACGAATATGCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0139
Ortholog function: integral membrane sensor signal transduction histidine kinase
Desulfovibrio salexigens DSM 2638 Desal_2196 -88 5 TGTGGCACAGCGTTTGCTC
Desulfovibrio vulgaris Hildenborough DVU0139 -79 4.8 AATGGTACGCTGTTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2333 -57 3.4 GGCGGCATCATGTCTGTTC
Position: -102
Score: 5
Sequence: TACGGCACGCCTCCTGCTT
Locus tag: Desal_2290
Desal_2290 -102 5 TACGGCACGCCTCCTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnN
Ortholog function: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Desulfomicrobium baculatum DSM 4028 Dbac_1496 -89 4.4 TGTGGCATCTGAATTGCTT
Desulfovibrio desulfuricans G20 Dde_0102 -96 4.7 GTTGGCACCGACTCTGCAA
Desulfovibrio salexigens DSM 2638 Desal_2290 -102 5 TACGGCACGCCTCCTGCTT
Desulfovibrio vulgaris Hildenborough DVU1258 -100 5.2 ATTGGCCCGCTCTTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_1590 -201 4.9 AGTGGACCGCTTCTTGCTT
Position: -59
Score: 4.6
Sequence: CATGGCACCAATTATGCTT
Locus tag: Desal_2292
Desal_2292 -59 4.6 CATGGCACCAATTATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0750
Ortholog function: methyl-accepting chemotaxis protein
Desulfovibrio salexigens DSM 2638 Desal_2292 -59 4.6 CATGGCACCAATTATGCTT
Desulfovibrio vulgaris Hildenborough DVU0750 -201 4.9 AATGGCACTGCTCTTGCTG
Desulfovibrio vulgaris str. Miyazaki F DvMF_2785 -63 5.3 CATGGCACGGCCCTTGCTG
Position: -77
Score: 4.8
Sequence: ATTGGCATTACCCTTGCTT
Locus tag: Desal_2461
Desal_2461 -77 4.8 ATTGGCATTACCCTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dbac_2976
Ortholog function: OmpA/MotB domain protein
Desulfomicrobium baculatum DSM 4028 Dbac_2976 -40 4.4 GTTGGCATGAATCTGGCTC
Desulfovibrio salexigens DSM 2638 Desal_2461 -77 4.8 ATTGGCATTACCCTTGCTT
Position: -41
Score: 3.4
Sequence: ATGGGTCCTGATTTTGCAG
Locus tag: Desal_2592
Desal_2592 -41 3.4 ATGGGTCCTGATTTTGCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliR
Ortholog function: Flagellar biosynthesis protein FliR
Desulfohalobium retbaense DSM 5692 Dret_0586 -51 4.5 GCTGGCATAATTTATGCTA
Desulfomicrobium baculatum DSM 4028 Dbac_3473 -30 4.7 TCTGGTCCGCGTTTTGCTG
Desulfovibrio desulfuricans G20 Dde_0378 -30 4.6 GATGGTCTGTTTTTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0193 -29 4.7 TTTGGCAACCATTTTGCAA
Desulfovibrio magneticus RS-1 DMR_23860 -29 4.6 CTTGGTCCAGCTTTTGCTA
Desulfovibrio salexigens DSM 2638 Desal_2592 -41 3.4 ATGGGTCCTGATTTTGCAG
Desulfovibrio vulgaris Hildenborough DVU3234 -29 4.8 CGTGGCCCGTATTTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2016 -29 5.1 CATGGCCCGCATCTTGCTG
Position: -77
Score: 4.3
Sequence: GCTGGCGCACCTATTGCCC
Locus tag: Desal_2601
Desal_2601 -77 4.3 GCTGGCGCACCTATTGCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU3225
Ortholog function: hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_3464 -95 4.8 CCTGGCCCGTTTTTTGCCA
Desulfovibrio desulfuricans G20 Dde_0387 -145 4.8 GCTGGCACGGGCCTTGTAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0321 -96 4.5 CTTGGCCCCTAATTTGCAT
Desulfovibrio magneticus RS-1 DMR_23950 -156 4.7 CTTGGCACAGGCCTTGTAT
Desulfovibrio salexigens DSM 2638 Desal_2601 -77 4.3 GCTGGCGCACCTATTGCCC
Desulfovibrio vulgaris Hildenborough DVU3225 -199 4.8 GCTGGCACGGGCCTTGTAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2007 -177 4.6 GCTGGCACAGGCTTTGTAT
Position: -43
Score: 4.6
Sequence: GATGGCATATTATTTGCTG
Locus tag: Desal_2604
Desal_2604 -43 4.6 GATGGCATATTATTTGCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpxC
Ortholog function: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-)
Desulfohalobium retbaense DSM 5692 Dret_2081 -40 4.9 CGTGGAATGATTTTTGCTT
Desulfomicrobium baculatum DSM 4028 Dbac_2789 -29 4.4 TCTGGCATGAAGTTTGATA
Desulfovibrio desulfuricans G20 Dde_2986 -41 4.8 AACGGCACGATTATTGCTT
Desulfovibrio salexigens DSM 2638 Desal_2604 -43 4.6 GATGGCATATTATTTGCTG
Desulfovibrio vulgaris Hildenborough DVU2917 -196 4 GACGGCAAGCCGCCTGCTG
-40 5.3 TCTGGCACATCTTTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1446 -38 5.3 TTTGGCACGGTTCATGCTC
Lawsonia intracellularis PHE/MN1-00 LI0627 -40 4.3 TTTGGATCGTTTATTGCAT
Position: -59
Score: 4.3
Sequence: GTTGGTACGTTTGCTGCAA
Locus tag: Desal_2614
Desal_2614 -59 4.3 GTTGGTACGTTTGCTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU3387
Ortholog function: hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_1772 -70 4.4 GCTGGCCCGAAATCTGCTA
Desulfovibrio desulfuricans G20 Dde_0108 -57 4.2 ATCGGCACTATGGTTGCTA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0311 -61 4.8 CTTGGCACTGTACTTGCTG
Desulfovibrio magneticus RS-1 DMR_05460 -13 4.1 GTCGGCACAAGGGTTGCAA
Desulfovibrio salexigens DSM 2638 Desal_2614 -59 4.3 GTTGGTACGTTTGCTGCAA
Desulfovibrio vulgaris Hildenborough DVU3387 -92 4.1 GCAGGTGCGGTTCTTGCTA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2067 -67 5 GCTGGCATTCCCCTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0507 -62 3.9 TAAGGCCTAAAATTTGCAT
Position: -81
Score: 4.8
Sequence: GTTGGCATGACTCTTGTAT
Locus tag: Desal_2827
Desal_2827 -81 4.8 GTTGGCATGACTCTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0410
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0313 -75 4.9 AATGGCATACAGTTTGCTT
Desulfovibrio magneticus RS-1 DMR_25590 -78 4.9 TTTGGCACGGTTGTTGTAA
Desulfovibrio salexigens DSM 2638 Desal_2827 -81 4.8 GTTGGCATGACTCTTGTAT
Desulfovibrio vulgaris Hildenborough DVU0410 -70 5.1 GTTGGCCCGGAATTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1546 -75 4.8 CATGGTCCGTTTCTTGCTT
Position: -115
Score: 5.2
Sequence: TTAGGCACGCCCCTTGCTT
Locus tag: Desal_2938
Desal_2938 -115 5.2 TTAGGCACGCCCCTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgE
Ortholog function: Flagellar hook protein FlgE
Desulfomicrobium baculatum DSM 4028 Dbac_1614 -84 4.1 CATGGACCCATTCCTGCAT
Desulfovibrio desulfuricans G20 Dde_0298 -86 5.3 TCTGGCACGGTCCATGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2091 -76 5.3 TCTGGCACGCTCTCTGCAT
Desulfovibrio salexigens DSM 2638 Desal_2938 -115 5.2 TTAGGCACGCCCCTTGCTT
Desulfovibrio vulgaris Hildenborough DVU0307 -59 5.3 TCTGGCACGGCTCGTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1808 -128 5.2 GCTGGCACGGCTCGTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0348 -77 5.2 CTTGGCATGGCTTCTGCTT
Position: -73
Score: 3.9
Sequence: GTAGGCAGGAATATTGCAA
Locus tag: Desal_2983
Desal_2983 -73 3.9 GTAGGCAGGAATATTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2896
Ortholog function: Tetratricopeptide domain protein
Desulfovibrio salexigens DSM 2638 Desal_2983 -73 3.9 GTAGGCAGGAATATTGCAA
Position: -69
Score: 5.1
Sequence: TTTGGCACACGCTCTGCTT
Locus tag: Desal_3004
Desal_3004 -69 5.1 TTTGGCACACGCTCTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flaB1
Ortholog function: Flagellin (flaB1)
Desulfomicrobium baculatum DSM 4028 Dbac_2430 -53 4.1 AATGGCATTCTGTGTGCAA
Desulfovibrio desulfuricans G20 Dde_1709 -53 5.1 TTTGGCACCACCTTTGCTC
Desulfovibrio salexigens DSM 2638 Desal_3004 -69 5.1 TTTGGCACACGCTCTGCTT
Desulfovibrio vulgaris Hildenborough DVU1441 -54 4.9 ATTGGCATCGTGTTTGCTG
Desulfovibrio vulgaris str. Miyazaki F DvMF_0244 -54 4.9 GTTGGCACCAACATTGCTT
Position: -43
Score: 4.7
Sequence: TTTGGCACGCCTCGTGAAT
Locus tag: Desal_3007
Desal_3007 -43 4.7 TTTGGCACGCCTCGTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliK
Ortholog function: Flagellar hook-length control protein FliK
Desulfovibrio magneticus RS-1 DMR_13730 -43 4.4 TTTGGAACGGGTCTTGAAG
Desulfovibrio salexigens DSM 2638 Desal_3007 -43 4.7 TTTGGCACGCCTCGTGAAT
Position: -67
Score: 3.9
Sequence: ATTGGCACGAATAGAGCTT
Locus tag: Desal_3028
Desal_3028 -67 3.9 ATTGGCACGAATAGAGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_2346
Ortholog function: OsmC family protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2346 -62 4.3 TCTGGCATCATTAGTGCAA
Desulfovibrio salexigens DSM 2638 Desal_3028 -67 3.9 ATTGGCACGAATAGAGCTT
Desulfovibrio salexigens DSM 2638 Desal_3544 -184 5.2 TTTGGCCCGCTTATTGCTC
Position: -65
Score: 5.1
Sequence: TTTGGCACAGTCCATGCTT
Locus tag: Desal_3066
Desal_3066 -65 5.1 TTTGGCACAGTCCATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: amt
Ortholog function: Ammonium transporter
Desulfohalobium retbaense DSM 5692 Dret_0113 -70 4.8 ATTGGCCCCATCCTTGCTA
Desulfomicrobium baculatum DSM 4028 Dbac_3049 -56 4.8 TTTGGCACTGCCTGTGCTT
Desulfovibrio desulfuricans G20 Dde_3492 -71 4.9 TTTGGCCCTCCTTTTGCTC
Desulfovibrio salexigens DSM 2638 Desal_3066 -65 5.1 TTTGGCACAGTCCATGCTT
Position: -65
Score: 4
Sequence: TCAGGCATAATTACTGCAT
Locus tag: Desal_3185
Desal_3185 -65 4 TCAGGCATAATTACTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1880
Ortholog function: hypothetical protein
Desulfovibrio salexigens DSM 2638 Desal_3185 -65 4 TCAGGCATAATTACTGCAT
Position: -111
Score: 4.8
Sequence: TTTGGCATGCGGATTGCCT
Locus tag: Desal_3303
Desal_3303 -111 4.8 TTTGGCATGCGGATTGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ald
Ortholog function: Alanine dehydrogenase (EC 1.4.1.1)
Desulfohalobium retbaense DSM 5692 Dret_1485 -210 4.6 TTTGGCAAAGTTTGTGCAT
Desulfomicrobium baculatum DSM 4028 Dbac_3071 -67 4.4 TGTGGTAAGCTTTTTGCCA
Desulfovibrio desulfuricans G20 Dde_1553 -84 5.1 TCTGGCAAGGTGTTTGCTT
Desulfovibrio magneticus RS-1 DMR_45640 -76 4.6 CCTGGCAAGGGACTTGCTA
Desulfovibrio salexigens DSM 2638 Desal_3303 -111 4.8 TTTGGCATGCGGATTGCCT
Desulfovibrio vulgaris Hildenborough DVU0571 -124 5 GTTGGCAAGGCCTTTGCTA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2154 -120 5 GTTGGCAAGGCGTTTGCTT
Position: -145
Score: 4.8
Sequence: TTTGGCACAATGCGTGCTT
Locus tag: Desal_3438
Desal_3438 -145 4.8 TTTGGCACAATGCGTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: amt
Ortholog function: Ammonium transporter
Desulfohalobium retbaense DSM 5692 Dret_2267 -53 5.1 TTTGGCACCTCTCTTGCCT
Desulfomicrobium baculatum DSM 4028 Dbac_3048 -45 5.2 TATGGCACCGTCCTTGCTC
Desulfovibrio desulfuricans G20 Dde_2311 -75 5.2 TCTGGCCTGCTGCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1147 -126 4.7 CTTGGCACAGATAGTGCTT
Desulfovibrio piger ATCC 29098 DESPIG_00642 -127 5.1 TATGGCACAGGGCTTGCTT
Desulfovibrio salexigens DSM 2638 Desal_3438 -145 4.8 TTTGGCACAATGCGTGCTT
Desulfovibrio vulgaris Hildenborough DVU1231 -81 5 GTTGGCACGCGACTTGCCT
Desulfovibrio vulgaris str. Miyazaki F DvMF_0866 -98 5.3 GATGGCACGCTCCTTGCCT
Position: -81
Score: 4.3
Sequence: TCTGGCATAACGAGTGCTT
Locus tag: Desal_3506
Desal_3506 -81 4.3 TCTGGCATAACGAGTGCTT
Supported by regulated orthologs from reference regulons