Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NifA-1 regulog to Lawsonia intracellularis PHE/MN1-00

Reference regulog properties
Source regulog: NifA-1 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Nitrogen assimilation
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Lawsonia intracellularis PHE/MN1-00
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 101 sites [see more]
Predicted regulatory interactions in Lawsonia intracellularis PHE/MN1-00
Locus tag Position Score Sequence
Position: -154
Score: 4
Sequence: TTTACCTTAAAGTATA
Locus tag: LI1129
LI1129 -154 4 TTTACCTTAAAGTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnQ
Ortholog function: ABC-type polar amino acid transport system, ATPase component
Desulfovibrio desulfuricans G20 Dde_1428 -253 5.1 TTTACAATTATGTAAC
-59 3.7 TTGACAATTTTGAGCA
23 3.5 TATTCATAAATGGTAC
Desulfovibrio salexigens DSM 2638 Desal_1519 -358 3.9 TTGTCTTTTTTGTATA
-197 4.5 TGTACATAAATGGAAA
Desulfovibrio vulgaris Hildenborough DVU2343 -403 3.7 TTGTCTTGTTTGTAAA
-248 4.1 ATTACTTTTTTGTCAC
Desulfovibrio vulgaris str. Miyazaki F DvMF_3151 -340 4.6 TTTACGTTTTTGTTAA
-67 4.7 CTGACAATATGGTAAA