Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DvMF_2930 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: DvMF_2930 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_2930
Regulated genes 2
Built upon 2 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -54
Score: 5.6
Sequence: TCGGGCATTGACGATGCAACG
Locus tag: DvMF_2925
DvMF_2925 -54 5.6 TCGGGCATTGACGATGCAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2925
Ortholog function: 5-carboxymethyl-2-hydroxymuconate delta-isomerase( EC:5.3.3.10 )
Desulfovibrio vulgaris str. Miyazaki F DvMF_2925 -54 5.6 TCGGGCATTGACGATGCAACG
Position: -59
Score: 6.3
Sequence: TTTTGCATTCTGCATGCAAAA
Locus tag: DvMF_2930
DvMF_2930 -59 6.3 TTTTGCATTCTGCATGCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2930
Ortholog function: transcriptional regulator, GntR family
Desulfovibrio vulgaris str. Miyazaki F DvMF_2930 -59 6.3 TTTTGCATTCTGCATGCAAAA