Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NifA-1 regulog to Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Reference regulog properties
Source regulog: NifA-1 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Nitrogen assimilation
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 101 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Locus tag Position Score Sequence
Position: -246
Score: 4.6
Sequence: CCTACATAAATGTAAA
Locus tag: Ddes_1147
Ddes_1147 -246 4.6 CCTACATAAATGTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: amtB
Ortholog function: Ammonium transporter
Desulfohalobium retbaense DSM 5692 Dret_2267 -173 3.9 GTAACAAATTTGTCCA
-132 4.2 ATGCCATTTTTGACAA
Desulfomicrobium baculatum DSM 4028 Dbac_3048 -387 4.5 TTTTCAATTTTGGAAG
Desulfovibrio desulfuricans G20 Dde_2311 -207 3.7 TTAACAAAATTGTGTT
-175 4.3 ATAACAAATATGTATA
Desulfovibrio magneticus RS-1 DMR_34890 -158 4.4 GTTGCAAAAATGTCAA
Desulfovibrio salexigens DSM 2638 Desal_3438 -204 4 TTTCCAATTATGTTTT
-153 4 TTTTCAGTTTTGGCAC
-91 3.7 TGTCTAAAATTGTAAA
-50 4 GAGACGAAATTGTAAA
Desulfovibrio vulgaris Hildenborough DVU1231 -159 3.9 ACGACAAAAATGCAAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_0866 -208 4.1 TTTACAAAAAAGAAAC
-176 4.3 GTTACCAAAATGGAAA
-175 3.9 TTACCAAAATGGAAAA