Propagation of NifA-1 regulog to Desulfovibrio vulgaris Hildenborough
| Source regulog: | NifA-1 - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | |
| Biological process: | Nitrogen assimilation |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Propagated regulon: | |
| Target genome | Desulfovibrio vulgaris Hildenborough |
| Orthologous TF(s) | DVU1949 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -275
Score: 4.7 Sequence: TATACATTTTTGGAAA
Position: -230
Score: 4.6 Sequence: ATTACAATAGTGTCAA
Position: -178
Score: 4.3 Sequence: TTTACTATTTTGAAAG
Locus tag: DVU1258
|
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| DVU1258 | -275 | 4.7 | TATACATTTTTGGAAA | |
| -230 | 4.6 | ATTACAATAGTGTCAA | ||
| -178 | 4.3 | TTTACTATTTTGAAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnN | ||||
| Ortholog function: Glutamine synthetase type III, GlnN (EC 6.3.1.2) | ||||
| Desulfomicrobium baculatum DSM 4028 | Dbac_1496 | -328 | 4 | TTGACATTTATGTGCA |
| -208 | 4.6 | TTTGCAAATTTGTAAT | ||
| -155 | 4.5 | ATTTCAAAAATGTAAT | ||
| Desulfovibrio desulfuricans G20 | Dde_0102 | -216 | 4.1 | TTAACAAAAAAGTTAA |
| -174 | 4.7 | TAAACATTTATGTAAA | ||
| Desulfovibrio magneticus RS-1 | DMR_10730 | -335 | 3.7 | TTGACACAATTGTTTC |
| -236 | 4.4 | TTTACATTATTGCTAG | ||
| Desulfovibrio salexigens DSM 2638 | Desal_2290 | -276 | 4.7 | TATACAATTTTGTAAC |
| -225 | 4.8 | ATTACATTTTTGTAAC | ||
| -182 | 4.6 | TCTACATTTTTGTAAG | ||
| Desulfovibrio vulgaris Hildenborough | DVU1258 | -411 | 4.3 | TTTACATATTTGATAC |
| -275 | 4.7 | TATACATTTTTGGAAA | ||
| -230 | 4.6 | ATTACAATAGTGTCAA | ||
| -178 | 4.3 | TTTACTATTTTGAAAG | ||
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_1590 | -332 | 3.9 | GTTACAAGTTTGCAAA |
| -288 | 3.9 | TGAACGAATTTGTAAA | ||
| -54 | 4 | GAAACAAATTTGTAAG | ||
|
Position: -92
Score: 4.9 Sequence: TTGACATTTCTGTAAG
Locus tag: DVU1952
|
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| DVU1952 | -92 | 4.9 | TTGACATTTCTGTAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU1952 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio vulgaris Hildenborough | DVU1952 | -92 | 4.9 | TTGACATTTCTGTAAG |
|
Position: -248
Score: 4.1 Sequence: ATTACTTTTTTGTCAC
Locus tag: DVU2343
|
||||
| DVU2343 | -248 | 4.1 | ATTACTTTTTTGTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnQ | ||||
| Ortholog function: ABC-type polar amino acid transport system, ATPase component | ||||
| Desulfovibrio desulfuricans G20 | Dde_1428 | -253 | 5.1 | TTTACAATTATGTAAC |
| -59 | 3.7 | TTGACAATTTTGAGCA | ||
| 23 | 3.5 | TATTCATAAATGGTAC | ||
| Desulfovibrio salexigens DSM 2638 | Desal_1519 | -358 | 3.9 | TTGTCTTTTTTGTATA |
| -197 | 4.5 | TGTACATAAATGGAAA | ||
| Desulfovibrio vulgaris Hildenborough | DVU2343 | -403 | 3.7 | TTGTCTTGTTTGTAAA |
| -248 | 4.1 | ATTACTTTTTTGTCAC | ||
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_3151 | -340 | 4.6 | TTTACGTTTTTGTTAA |
| -67 | 4.7 | CTGACAATATGGTAAA | ||
|
Position: -176
Score: 3.9 Sequence: TGAACAACATTGTCAA
Position: -135
Score: 4.8 Sequence: CTTCCAATAATGTAAG
Locus tag: DVU3392
|
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| DVU3392 | -176 | 3.9 | TGAACAACATTGTCAA | |
| -135 | 4.8 | CTTCCAATAATGTAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: Glutamine synthetase type I (EC 6.3.1.2) | ||||
| Desulfohalobium retbaense DSM 5692 | Dret_2389 | -182 | 4.5 | TTTTCGTTTTTGTCAA |
| -173 | 3.9 | TTGTCAATATTGGATC | ||
| -141 | 5 | TTGACAAAAATGAAAA | ||
| Desulfomicrobium baculatum DSM 4028 | Dbac_2819 | -89 | 4.6 | TTTCCAATTTTGCAAA |
| Desulfovibrio desulfuricans G20 | Dde_0104 | -140 | 4 | TTTGCAAAAATGTGAT |
| Desulfovibrio vulgaris Hildenborough | DVU3392 | -176 | 3.9 | TGAACAACATTGTCAA |
| -135 | 4.8 | CTTCCAATAATGTAAG | ||
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2099 | -203 | 4.9 | TTTACAATGATGTCAA |