Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RbsR regulog to Thermotoga maritima MSB8

Reference regulog properties
Source regulog: RbsR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga maritima MSB8
Orthologous TF(s) TM0949
Regulated genes 1
Built upon 15 sites [see more]
Predicted regulatory interactions in Thermotoga maritima MSB8
Locus tag Position Score Sequence
Position: -46
Score: 6.5
Sequence: TTGTGAAAACGATTTCGAAA
Position: -34
Score: 5.9
Sequence: TTTCGAAAACGATTTCATCA
Locus tag: TM0960
TM0960 -46 6.5 TTGTGAAAACGATTTCGAAA
-34 5.9 TTTCGAAAACGATTTCATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsK
Ortholog function: Ribokinase (EC 2.7.1.15)
Thermotoga maritima MSB8 TM0960 -46 6.5 TTGTGAAAACGATTTCGAAA
-34 5.9 TTTCGAAAACGATTTCATCA
Thermotoga neapolitana DSM 4359 CTN_1616 32 6.5 TTGTGAAAACGATTTCGAAA
44 5.9 TTTCGAAAACGATTTCATCA
Thermotoga petrophila RKU-1 Tpet_1789 -56 6.5 TTGTGAAAACGATTTCGAAA
-44 6.6 TTTCGAAAACGTTTTCAAAG
Thermotoga naphthophila RKU-10 Tnap_1790 -56 6.5 TTGTGAAAACGATTTCGAAA
-44 6.6 TTTCGAAAACGTTTTCAAAG
Thermosipho africanus TCF52B THA_674 -42 6 ATACGAAAACGTTTTCGAAA
-30 5.9 TTTCGAAAACGTTTTCTAGG
Petrotoga mobilis SJ95 Pmob_0924 -43 6 TTCCGAAAACGTTTGCATAA
Thermotogales bacterium TBF 19.5.1 Kole_0601 -39 5 TCATGTAAACGTTTACGTAA
-27 5.6 TTACGTAAACGTTTTCAGGA
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