Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ManR regulog to Thermotoga maritima MSB8

Reference regulog properties
Source regulog: ManR - Thermotogales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Mannan and beta-mannosides utilization
Effector: Mannose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga maritima MSB8
Orthologous TF(s) TM1224
Regulated genes 2
Built upon 9 sites [see more]
Predicted regulatory interactions in Thermotoga maritima MSB8
Locus tag Position Score Sequence
Position: -38
Score: 7.5
Sequence: AAATAAGTAAAGTTTACTAATTA
Locus tag: TM1227
TM1227 -38 7.5 AAATAAGTAAAGTTTACTAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: manB
Ortholog function: Endo-1,4-beta-mannosidase
Thermotoga maritima MSB8 TM1227 -38 7.5 AAATAAGTAAAGTTTACTAATTA
Thermotoga sp. RQ2 TRQ2_1591 -38 7.5 AAATAAGTAAAGTTTACTAATTA
Thermotoga neapolitana DSM 4359 CTN_1345 -38 6.9 AAATAAGTACAGATTACTAATTA
Thermotoga petrophila RKU-1 Tpet_1542 -38 7.5 AAATAAGTAAAGTTTACTAATTA
Thermotoga naphthophila RKU-10 Tnap_1565 -38 7.5 AAATAAGTAAAGTTTACTAATTA
Position: -50
Score: 5.1
Sequence: TTATTAGTAAGTGTTATTTATTA
Locus tag: TM1746
TM1746 -50 5.1 TTATTAGTAAGTGTTATTTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtpE
Ortholog function: Beta-mannan and fructose induced hypothetical ABC transporter, periplasmic oligopeptide-binding protein
Thermotoga maritima MSB8 TM1746 -120 4.5 GAATAATTACTCTTCACTTCGTT
-50 5.1 TTATTAGTAAGTGTTATTTATTA
Thermotoga sp. RQ2 TRQ2_1079 -120 4.5 GAATAATTACTCTTCACTTCGTT
-50 5.1 TTATTAGTAAGTGTTATTTATTA