Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RbsR regulog to Thermotoga lettingae TMO

Reference regulog properties
Source regulog: RbsR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga lettingae TMO
Orthologous TF(s) Tlet_1324
Regulated genes 1
Built upon 15 sites [see more]
Predicted regulatory interactions in Thermotoga lettingae TMO
Locus tag Position Score Sequence
Position: -59
Score: 6.5
Sequence: TCTTGAAAACGTTTTCAAGA
Position: -47
Score: 5.8
Sequence: TTTCAAGAACGTTTTCAAAA
Locus tag: Tlet_1324
Tlet_1324 -59 6.5 TCTTGAAAACGTTTTCAAGA
-47 5.8 TTTCAAGAACGTTTTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsR
Ortholog function: Predicted regulator of ribose utilization, LacI family
Thermotoga maritima MSB8 TM0949 -46 6.5 TTGTGAAAACGATTTCGAAA
-34 5.9 TTTCGAAAACGATTTCATCA
Thermotoga neapolitana DSM 4359 CTN_1627 32 6.5 TTGTGAAAACGATTTCGAAA
44 5.9 TTTCGAAAACGATTTCATCA
Thermotoga petrophila RKU-1 Tpet_1790 -56 6.5 TTGTGAAAACGATTTCGAAA
-44 6.6 TTTCGAAAACGTTTTCAAAG
Thermotoga naphthophila RKU-10 Tnap_1791 -56 6.5 TTGTGAAAACGATTTCGAAA
-44 6.6 TTTCGAAAACGTTTTCAAAG
Thermotoga lettingae TMO Tlet_1324 -59 6.5 TCTTGAAAACGTTTTCAAGA
-47 5.8 TTTCAAGAACGTTTTCAAAA
Thermosipho africanus TCF52B THA_673 -42 6 ATACGAAAACGTTTTCGAAA
-30 5.9 TTTCGAAAACGTTTTCTAGG
Petrotoga mobilis SJ95 Pmob_0919 -43 6 TTCCGAAAACGTTTGCATAA
Thermotogales bacterium TBF 19.5.1 Kole_0605 -39 5 TCATGTAAACGTTTACGTAA
-27 5.6 TTACGTAAACGTTTTCAGGA
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