Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CymR regulog to Macrococcus caseolyticus JCSC5402

Reference regulog properties
Source regulog: CymR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Macrococcus caseolyticus JCSC5402
Orthologous TF(s) MCCL_1264
Regulated genes 4
Built upon 69 sites [see more]
Predicted regulatory interactions in Macrococcus caseolyticus JCSC5402
Locus tag Position Score Sequence
Position: -40
Score: 5.8
Sequence: TATTTCTTACTAAATCTATCGGAATTA
Locus tag: MCCL_0379
MCCL_0379 -40 5.8 TATTTCTTACTAAATCTATCGGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1850
Ortholog function: putative transporter for thiosulphate
Staphylococcus epidermidis ATCC 12228 SE1646 -35 4.6 AATACCTTAGTATTTATATCGGAAAAG
Macrococcus caseolyticus JCSC5402 MCCL_0379 -40 5.8 TATTTCTTACTAAATCTATCGGAATTA
Position: -38
Score: 5.3
Sequence: CTATTCCGAGTAAATTGATATGAATAG
Locus tag: MCCL_1425
MCCL_1425 -38 5.3 CTATTCCGAGTAAATTGATATGAATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyA
Ortholog function: L-cystine uptake ABC transporter, L-cystine-binding protein TcyA
Staphylococcus aureus subsp. aureus N315 SA2202 -40 6.2 TTATTCCGATTAGAATAATAAGAATAA
Staphylococcus capitis SK14 STACA0001_1063 -40 6 TTATTCCGATTAGAATAATAAGATTAA
Staphylococcus epidermidis ATCC 12228 SE1993 -40 6.2 TTATTCCGATTAGAATAATAAGAATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1910 -40 5.4 TTATTCCGATGAGAATGATAAGGATAA
Staphylococcus haemolyticus JCSC1435 SH0639 -41 5.9 TTATTCTGACTAATCTAATAGGAATAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0242 -37 5.8 TTATTCCGATAAGAATAATAAGAATAG
Macrococcus caseolyticus JCSC5402 MCCL_1425 -38 5.3 CTATTCCGAGTAAATTGATATGAATAG
Position: -46
Score: 5.6
Sequence: TAATCCCGAGTTATCTGATAAGAATAA
Locus tag: MCCL_1789
MCCL_1789 -46 5.6 TAATCCCGAGTTATCTGATAAGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mccA
Ortholog function: cystathionine beta-synthase
Staphylococcus aureus subsp. aureus N315 SA0418 -88 5.8 TAATTCTTATCTGAAAAGTAAGAATTA
Staphylococcus capitis SK14 STACA0001_1480 -96 5.4 TAATTCATACCTGATAAGTAAGAATTT
Staphylococcus epidermidis ATCC 12228 SE2324 -96 5.7 TAATTCATATCTGATAAGTAAGAATTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0086 -92 5.6 TAATCCATATCAGTATAGTAGGAATAA
Staphylococcus haemolyticus JCSC1435 SH2549 -109 5.4 TAATTCATAGTGATTGAGTAAGAATTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0252 -144 5.1 GTATGCTTACTGAAAAAGTAGGAATTA
-57 5 TAATTCTTATCGGTATAGTAAGGTATT
Macrococcus caseolyticus JCSC5402 MCCL_1789 -46 5.6 TAATCCCGAGTTATCTGATAAGAATAA
Position: -50
Score: 5.4
Sequence: TAAATCCGATAAGCGTAATAAGAATAA
Locus tag: MCCL_1900
MCCL_1900 -50 5.4 TAAATCCGATAAGCGTAATAAGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: cysteine synthase
Staphylococcus aureus subsp. aureus N315 SA0471 -55 5.1 TATATCCGATAAATAAACTAAGATTTC
Staphylococcus capitis SK14 STACA0001_2088 -57 4.9 TATATCCGATAGGAAAACTAAGTTTTA
Staphylococcus epidermidis ATCC 12228 SE2270 -58 4.8 TATATCCGATAGAAAAACTAAGTATTG
Staphylococcus carnosus subsp. carnosus TM300 Sca_0164 -143 4.4 GATATCCGATGAAATAGCTAAGATATA
Staphylococcus haemolyticus JCSC1435 SH2497 -56 4.9 TATATCCGATAGAAAAACTAAGTTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2243 -55 5.1 TATATCCGATTGAAAAAGTAGGTTTTA
Macrococcus caseolyticus JCSC5402 MCCL_1900 -50 5.4 TAAATCCGATAAGCGTAATAAGAATAA
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