Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Macrococcus caseolyticus JCSC5402

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 3 9
TF ArsR Arsenate; Arsenite Arsenic resistance 1 1
TF BirA Biotin Biotin biosynthesis 2 2
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-diphosphate Carbon catabolism 27 32
TF CggR Fructose-1,6-diphosphate Glycolysis 1 1
TF CodY Branched-chain amino acids Amino acid metabolism 34 76
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 4 5
TF FapR Malonyl-CoA; Malonyl-ACP Fatty acid biosynthesis 5 5
TF FruR Fructose-6-phosphate Fructose utilization 1 3
TF Fur Iron ion, (Fe2+) Iron homeostasis 7 12
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 1 1
TF GntR Gluconate Gluconate utilization 1 1
TF HisR Histidine Histidine biosynthesis 2 3
TF HrcA Heat shock Heat shock response 2 2
TF HutR Histidine Histidine utilization 2 2
TF LexA DNA damage SOS response 7 9
TF MalR Maltose Maltose utilization; Maltodextrin utilization 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 3
TF NreC NreB, sensor histidine kinase (Nitrate, Nitrite) Nitrate and nitrite respiration 2 2
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response 7 11
TF Rex NADH Energy metabolism 5 6
TF ScrR Sucrose-6-phosphate Sucrose utilization 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 2 4