Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PerR regulog to Staphylococcus lugdunensis HKU09-01

Reference regulog properties
Source regulog: PerR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Oxidative stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus lugdunensis HKU09-01
Orthologous TF(s) SLGD_01068
Regulated genes 6
Built upon 69 sites [see more]
Predicted regulatory interactions in Staphylococcus lugdunensis HKU09-01
Locus tag Position Score Sequence
Position: -108
Score: 6
Sequence: TTATAATAATTATAA
Position: -67
Score: 5.8
Sequence: TTAGAATTATTATAA
Locus tag: SLGD_00876
SLGD_00876 -108 6 TTATAATAATTATAA
-67 5.8 TTAGAATTATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: metalloregulation DNA-binding stress protein
Staphylococcus aureus subsp. aureus N315 SA1941 -112 5.8 TTAGAATAATTATAA
-71 5.6 TTAGAATCATTATAA
-54 5.2 TAATAATTAATATAA
Staphylococcus capitis SK14 STACA0001_0845 -109 5.2 TTGAAATAATTATAA
-68 5.8 TTAGAATTATTATAA
-54 4.8 ATATAATAATTATTG
Staphylococcus epidermidis ATCC 12228 SE1738 -58 5.8 TTAGAATTATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1644 -111 5.5 TTAGAATTATTTTAA
-70 5.8 TTAGAATTATTATAA
-53 5.2 TAATAGTTATTATAA
Staphylococcus haemolyticus JCSC1435 SH0895 -71 5.8 TTATAATCATTATAA
-54 5.2 TAATAATAATTGTAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0745 -129 5.3 TTAAAATGATTCTAA
-88 5.8 TTAGAATTATTATAA
-71 5.2 TAATAATTATTGTAA
Macrococcus caseolyticus JCSC5402 MCCL_1798 -55 5.6 TTAGAATGATTATAA
-38 5.2 TAATAATTAATATAA
Position: -35
Score: 5.6
Sequence: TAATAATTATTATTA
Locus tag: SLGD_01068
SLGD_01068 -35 5.6 TAATAATTATTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: peroxide-responsive repressor PerR
Staphylococcus aureus subsp. aureus N315 SA1678 -37 5.6 TAATAATAATTATTA
Staphylococcus capitis SK14 STACA0001_1914 -36 5.6 TAATAATTATTATTA
Staphylococcus epidermidis ATCC 12228 SE1545 -36 5.6 TAATAATAATTATTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1434 -36 5.6 TAATAATTATTATTA
Staphylococcus haemolyticus JCSC1435 SH1102 -35 5.6 TAATAATTATTATTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0932 -36 5.5 TAATAATAATTCTTA
Macrococcus caseolyticus JCSC5402 MCCL_1591 -33 4.8 ATAGAATTACTATAA
Position: -40
Score: 5.5
Sequence: TTAAAATGATTATAA
Locus tag: SLGD_01414
SLGD_01414 -40 5.5 TTAAAATGATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: iron uptake regulatory protein Fur
Staphylococcus aureus subsp. aureus N315 SA1329 -122 5.6 TTATAATcATTcTAA
Staphylococcus capitis SK14 STACA0001_1739 -40 5.5 TTAAAATGATTATAA
Staphylococcus epidermidis ATCC 12228 SE1182 -40 5.5 TTAAAATGATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1124 -40 5.5 TTAAAATGATTATAA
Staphylococcus haemolyticus JCSC1435 SH1418 -40 5.5 TTAAAATGATTATAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1254 -40 5.5 TTAAAATGATTATAA
Macrococcus caseolyticus JCSC5402 MCCL_1147 -95 5.6 TAATAATTATTCTAA
Position: -45
Score: 6
Sequence: TTATAATTATTATAA
Locus tag: SLGD_01564
SLGD_01564 -45 6 TTATAATTATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: catalase
Staphylococcus aureus subsp. aureus N315 SA1170 -26 6 TTATAATTATTATAA
Staphylococcus capitis SK14 STACA0001_1577 -42 5.5 TTATAATTATTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2336 -33 5.8 TTATAATTATTCTAA
Staphylococcus haemolyticus JCSC1435 SH1573 -37 6 TTATAATTATTATAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1432 -41 5.6 TAATAATTATTATTA
Macrococcus caseolyticus JCSC5402 MCCL_0056 -46 5.4 TTATAATAATTATCA
-29 5.4 AAATAATTATTATAA
Position: -69
Score: 5.8
Sequence: TTAGAATTATTATAA
Locus tag: SLGD_02481
SLGD_02481 -69 5.8 TTAGAATTATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahpC
Ortholog function: alkyl hydroperoxide reductase subunit C
Staphylococcus aureus subsp. aureus N315 SA0366 -74 5.8 TTAGAATTATTATAA
Staphylococcus capitis SK14 STACA0001_1447 -76 5.8 TTAGAATTATTATAA
Staphylococcus epidermidis ATCC 12228 SE2357 -75 5.8 TTAGAATTATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0039 -95 5.8 TTAGAATTATTATAA
Staphylococcus haemolyticus JCSC1435 SH2592 -77 5.8 TTAGAATTATTATAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2333 -86 5.8 TTAGAATTATTATAA
Macrococcus caseolyticus JCSC5402 MCCL_0098 -125 5.2 TTGAAATAATTATAA
-52 5.7 TTAGAATTATTCTAA
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