Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PerR regulog to Staphylococcus epidermidis ATCC 12228

Reference regulog properties
Source regulog: PerR - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Oxidative stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus epidermidis ATCC 12228
Orthologous TF(s) SE1545
Regulated genes 6
Built upon 69 sites [see more]
Predicted regulatory interactions in Staphylococcus epidermidis ATCC 12228
Locus tag Position Score Sequence
Position: -55
Score: 5.7
Sequence: TTAAAATTATTATAA
Locus tag: SE0606
SE0606 -55 5.7 TTAAAATTATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufC
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0774 -56 5.7 TTAAAATTATTATAA
Staphylococcus capitis SK14 STACA0001_0212 -55 5.7 TTAAAATTATTATAA
Staphylococcus epidermidis ATCC 12228 SE0606 -55 5.7 TTAAAATTATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0458 -58 5.7 TTAAAATTATTATAA
Staphylococcus haemolyticus JCSC1435 SH2039 -55 5.7 TTAAAATTATTATAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1861 -57 5.7 TTAAAATTATTATAA
Macrococcus caseolyticus JCSC5402 MCCL_0542 -57 5.7 TTAAAATTATTATAA
Position: -40
Score: 5.5
Sequence: TTAAAATGATTATAA
Locus tag: SE1182
SE1182 -40 5.5 TTAAAATGATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fur
Ortholog function: iron uptake regulatory protein Fur
Staphylococcus aureus subsp. aureus N315 SA1329 -122 5.6 TTATAATcATTcTAA
Staphylococcus capitis SK14 STACA0001_1739 -40 5.5 TTAAAATGATTATAA
Staphylococcus epidermidis ATCC 12228 SE1182 -40 5.5 TTAAAATGATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1124 -40 5.5 TTAAAATGATTATAA
Staphylococcus haemolyticus JCSC1435 SH1418 -40 5.5 TTAAAATGATTATAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1254 -40 5.5 TTAAAATGATTATAA
Macrococcus caseolyticus JCSC5402 MCCL_1147 -95 5.6 TAATAATTATTCTAA
Position: -36
Score: 5.6
Sequence: TAATAATAATTATTA
Position: -33
Score: 5.2
Sequence: TAATAATTATTATTT
Locus tag: SE1545
SE1545 -36 5.6 TAATAATAATTATTA
-33 5.2 TAATAATTATTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: peroxide-responsive repressor PerR
Staphylococcus aureus subsp. aureus N315 SA1678 -37 5.6 TAATAATAATTATTA
Staphylococcus capitis SK14 STACA0001_1914 -36 5.6 TAATAATTATTATTA
Staphylococcus epidermidis ATCC 12228 SE1545 -36 5.6 TAATAATAATTATTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1434 -36 5.6 TAATAATTATTATTA
Staphylococcus haemolyticus JCSC1435 SH1102 -35 5.6 TAATAATTATTATTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0932 -36 5.5 TAATAATAATTCTTA
Macrococcus caseolyticus JCSC5402 MCCL_1591 -33 4.8 ATAGAATTACTATAA
Position: -126
Score: 5.6
Sequence: TTAGAATAATTATTA
Position: -84
Score: 5.6
Sequence: TTAGAATAATTATTA
Locus tag: SE1578
SE1578 -126 5.6 TTAGAATAATTATTA
-84 5.6 TTAGAATAATTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Staphylococcus aureus subsp. aureus N315 SA1709 -92 5.8 TTATAATTATTATTA
Staphylococcus capitis SK14 STACA0001_1946 -132 5.5 TTAGAATAATTTTAA
-89 5.6 TTAGAATAATTATTA
Staphylococcus epidermidis ATCC 12228 SE1578 -126 5.6 TTAGAATAATTATTA
-84 5.6 TTAGAATAATTATTA
Staphylococcus haemolyticus JCSC1435 SH1060 -99 5.8 TTATAATAATTATTA
Position: -58
Score: 5.8
Sequence: TTAGAATTATTATAA
Locus tag: SE1738
SE1738 -58 5.8 TTAGAATTATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: metalloregulation DNA-binding stress protein
Staphylococcus aureus subsp. aureus N315 SA1941 -112 5.8 TTAGAATAATTATAA
-71 5.6 TTAGAATCATTATAA
-54 5.2 TAATAATTAATATAA
Staphylococcus capitis SK14 STACA0001_0845 -109 5.2 TTGAAATAATTATAA
-68 5.8 TTAGAATTATTATAA
-54 4.8 ATATAATAATTATTG
Staphylococcus epidermidis ATCC 12228 SE1738 -58 5.8 TTAGAATTATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1644 -111 5.5 TTAGAATTATTTTAA
-70 5.8 TTAGAATTATTATAA
-53 5.2 TAATAGTTATTATAA
Staphylococcus haemolyticus JCSC1435 SH0895 -71 5.8 TTATAATCATTATAA
-54 5.2 TAATAATAATTGTAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0745 -129 5.3 TTAAAATGATTCTAA
-88 5.8 TTAGAATTATTATAA
-71 5.2 TAATAATTATTGTAA
Macrococcus caseolyticus JCSC5402 MCCL_1798 -55 5.6 TTAGAATGATTATAA
-38 5.2 TAATAATTAATATAA
Position: -75
Score: 5.8
Sequence: TTAGAATTATTATAA
Locus tag: SE2357
SE2357 -75 5.8 TTAGAATTATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahpC
Ortholog function: alkyl hydroperoxide reductase subunit C
Staphylococcus aureus subsp. aureus N315 SA0366 -74 5.8 TTAGAATTATTATAA
Staphylococcus capitis SK14 STACA0001_1447 -76 5.8 TTAGAATTATTATAA
Staphylococcus epidermidis ATCC 12228 SE2357 -75 5.8 TTAGAATTATTATAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0039 -95 5.8 TTAGAATTATTATAA
Staphylococcus haemolyticus JCSC1435 SH2592 -77 5.8 TTAGAATTATTATAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2333 -86 5.8 TTAGAATTATTATAA
Macrococcus caseolyticus JCSC5402 MCCL_0098 -125 5.2 TTGAAATAATTATAA
-52 5.7 TTAGAATTATTCTAA
© 2009-2020 RegPrecise