Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of MalR regulog to Pseudoalteromonas haloplanktis TAC125

Reference regulog properties
Source regulog: MalR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Maltodextrin utilization
Effector: Maltose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pseudoalteromonas haloplanktis TAC125
Orthologous TF(s) PSHAa1363
Regulated genes 3
Built upon 67 sites [see more]
Predicted regulatory interactions in Pseudoalteromonas haloplanktis TAC125
Locus tag Position Score Sequence
Position: -128
Score: 6.1
Sequence: AGTGCATACGTATGCAGT
Locus tag: PSHAa1351
PSHAa1351 -128 6.1 AGTGCATACGTATGCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malZ
Ortholog function: Maltodextrin glucosidase (EC 3.2.1.20)
Shewanella sp ANA-3 Shewana3_2311 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella sp MR-4 Shewmr4_2133 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella sp MR-7 Shewmr7_2209 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella baltica OS155 Sbal_2287 -312 6 AGTGCATACGTATTCAAT
-163 6.2 TCTGCATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2028 -292 6.1 TATGCATACGTATTCAAT
-143 6.2 TTTGCATACGTATGCAGT
Shewanella frigidimarina NCIMB 400 Sfri_1788 -296 6 TATGCATACGTATTCAAC
-147 6.2 TTTGCATACGTATGCAGG
Shewanella amazonensis SB2B Sama_1662 -317 6.1 AGTGCATACGTATTCAAA
-167 6.1 TGTGCATACGTATGCAGC
Shewanella loihica PV-4 Shew_1889 -311 6.1 TATGCATACGTATTCAAA
-160 6.2 TTTGCATACGTATGCAGT
Shewanella piezotolerans WP3 swp_2670 -303 6.1 TATGCATACGTATTCAAT
-154 5.9 ATTACATACGTATGCAGA
Shewanella woodyi ATCC 51908 Swoo_2210 -198 6.1 TATGCATACGTATTCAAA
-47 6.2 TATGCATACGTATGCAGA
Position: -86
Score: 6
Sequence: CCTGAATACGTATGCAAC
Locus tag: PSHAa2848
PSHAa2848 -86 6 CCTGAATACGTATGCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: susB
Ortholog function: Alpha-glucosidase (EC 3.2.1.20)
Shewanella oneidensis MR-1 SO_2450 -90 5.4 GTGGAATACGTATGCAAG
Shewanella sp ANA-3 Shewana3_1931 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-4 Shewmr4_1876 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-7 Shewmr7_2102 -90 6 GGTGAATACGTATGCAAA
Shewanella baltica OS155 Sbal_2329 -90 5.9 GGTGAATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2002 -100 5.7 CCTGAATACGTATGTAGT
Shewanella frigidimarina NCIMB 400 Sfri_1777 -92 6.1 ACTGAATACGTATGCAAA
Shewanella amazonensis SB2B Sama_1108 -89 6 GCTGAATACGTATGCAGC
Shewanella loihica PV-4 Shew_1876 -164 5.9 GGTGAATACGTATGCAGC
Shewanella piezotolerans WP3 swp_2676 -111 6.1 TTTGAATACGTATGCAAG
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