Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FabR regulog to Pseudoalteromonas haloplanktis TAC125

Reference regulog properties
Source regulog: FabR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Pseudoalteromonas haloplanktis TAC125
Orthologous TF(s) PSHAa2896
Regulated genes 4
Built upon 118 sites [see more]
Predicted regulatory interactions in Pseudoalteromonas haloplanktis TAC125
Locus tag Position Score Sequence
Position: -92
Score: 5.9
Sequence: AGCGTACACTTGTGCGCT
Locus tag: PSHAa2584
PSHAa2584 -92 5.9 AGCGTACACTTGTGCGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: plsC
Ortholog function: 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
Shewanella oneidensis MR-1 SO_0567 -80 4.9 AGCTTACAGATGTAAACA
Shewanella putrefaciens CN-32 Sputcn32_3308 -38 4.6 GGCTTACAGATGTAAACA
Shewanella sp W3-18-1 Sputw3181_0633 -38 4.6 GGCTTACAGATGTAAACA
Shewanella sp ANA-3 Shewana3_0568 -41 4.9 AGCTTACAGATGTAAACA
Shewanella sp MR-4 Shewmr4_0569 -41 4.9 AGCTTACAGATGTAAACA
Shewanella sp MR-7 Shewmr7_3461 -41 4.9 AGCTTACAGATGTAAACA
Shewanella baltica OS155 Sbal_0529 -80 4.9 AGCTTACAGATGTAAACA
Shewanella denitrificans OS217 Sden_0530 -80 4.9 AGCGTACATATGTAAACA
Shewanella frigidimarina NCIMB 400 Sfri_3514 -80 4.9 AGCGTACATATGTAAACA
Shewanella amazonensis SB2B Sama_3139 -80 4.8 AGCGCACACGTGTAAACA
Shewanella pealeana ATCC 700345 Spea_3713 -104 4.8 AGGCTACACGTGTAAACT
Shewanella halifaxensis HAW-EB4 Shal_3798 -104 4.8 AGGCTACACGTGTAAACT
Shewanella piezotolerans WP3 swp_0559 -116 4.6 AGGCTACATGTGTAAACT
Position: -113
Score: 6.2
Sequence: AGCGTACAACTGTAAGCT
Locus tag: PSHAa2896
PSHAa2896 -113 6.2 AGCGTACAACTGTAAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabR
Ortholog function: Unsaturated fatty acid biosythesis repressor FabR, TetR family
Shewanella pealeana ATCC 700345 Spea_0163 -55 6 AGCGTACATCTGTACGCC
Position: -31
Score: 6.2
Sequence: AGCTTACAGTTGTACGCT
Locus tag: PSHAa2897
PSHAa2897 -31 6.2 AGCTTACAGTTGTACGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: OLE1
Ortholog function: Fatty acid desaturase (EC 1.14.19.1)
Shewanella oneidensis MR-1 SO_0197 -42 6.3 AGCTTACAGCTGTACGCT
Shewanella putrefaciens CN-32 Sputcn32_3542 -43 6.2 AGCTTACAGATGTACGCT
Shewanella sp W3-18-1 Sputw3181_3679 -43 6.2 AGCTTACAGATGTACGCT
Shewanella sp ANA-3 Shewana3_0177 -21 6.2 AGCTTACAGTTGTACGCT
Shewanella sp MR-4 Shewmr4_0176 -21 6.2 AGCTTACAGTTGTACGCT
Shewanella sp MR-7 Shewmr7_0171 -21 6.2 AGCTTACAGTTGTACGCT
Shewanella baltica OS155 Sbal_4181 -43 6.2 AGCTTACAGATGTACGCT
Shewanella denitrificans OS217 Sden_0229 -41 6.2 AGCTTACAGATGTACGCT
Shewanella frigidimarina NCIMB 400 Sfri_0123 -53 6.2 AGCGTACAATTGTACGCT
Shewanella amazonensis SB2B Sama_0191 -29 6.3 AGCTTACAGCTGTACGCT
Shewanella loihica PV-4 Shew_0136 -43 6 GGCTTACAGCTGTACGCT
Shewanella pealeana ATCC 700345 Spea_0162 -9 6 GGCGTACAGATGTACGCT
Shewanella halifaxensis HAW-EB4 Shal_4156 -40 6.3 AGCGTACAGATGTACGCT
Shewanella piezotolerans WP3 swp_0204 -40 6.4 AGCGTACAGCTGTACGCT
Shewanella sediminis HAW-EB3 Ssed_4340 -41 6.3 AGCGTACAGATGTACGCT
Shewanella woodyi ATCC 51908 Swoo_4712 -41 6.3 AGCGTACAGATGTACGCT
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