Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RbsR regulog to Shewanella pealeana ATCC 700345

Reference regulog properties
Source regulog: RbsR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella pealeana ATCC 700345
Orthologous TF(s) Spea_0519
Regulated genes 1
Built upon 4 sites [see more]
Predicted regulatory interactions in Shewanella pealeana ATCC 700345
Locus tag Position Score Sequence
Position: -93
Score: 6.3
Sequence: TTATCGAAACGTTTCGATCG
Locus tag: Spea_0514
Spea_0514 -93 6.3 TTATCGAAACGTTTCGATCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsD
Ortholog function: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Shewanella pealeana ATCC 700345 Spea_0514 -126 6.2 ATATCGAAACGTTTCGATTA
-93 6.3 TTATCGAAACGTTTCGATCG
Shewanella halifaxensis HAW-EB4 Shal_0578 -113 6.2 ATATCGAAACGTTTCGATTA
-80 6.3 TTATCGAAACGTTTCGATCG
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