Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NorR regulog to Shewanella pealeana ATCC 700345

Reference regulog properties
Source regulog: NorR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella pealeana ATCC 700345
Orthologous TF(s) Spea_3444
Regulated genes 2
Built upon 91 sites [see more]
Predicted regulatory interactions in Shewanella pealeana ATCC 700345
Locus tag Position Score Sequence
Position: -154
Score: 4.7
Sequence: AAGTGTAAAATTGACATTG
Locus tag: Spea_3444
Spea_3444 -154 4.7 AAGTGTAAAATTGACATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: norR
Ortholog function: anaerobic nitric oxide reductase transcription regulator, Fis family
Shewanella putrefaciens CN-32 Sputcn32_3073 -50 4.6 CTGTGTCAATATCACAATT
Shewanella sp W3-18-1 Sputw3181_0872 -50 4.6 CTGTGTCAATATCACAATT
Shewanella sp ANA-3 Shewana3_0845 -166 3.7 AGGTGTCGTTTAGGCACCT
-58 4.6 CTGTGTCAATATAACAATC
Shewanella sp MR-4 Shewmr4_3090 -167 3.7 AGGTGTCGTTTAGGCACCT
-58 4.6 CTGTGTCAATATAACAATC
Shewanella sp MR-7 Shewmr7_0882 -166 3.7 AGGTGTCGTTTAGGCACCT
-58 4.6 CTGTGTCAATATAACAATC
Shewanella frigidimarina NCIMB 400 Sfri_3254 -58 4.4 TGTTGTTATATTCACACTT
-43 5 ACTTGTCATAATGACATCA
Shewanella amazonensis SB2B Sama_0727 -76 5 CCATGTCAAAATGACAATT
Shewanella loihica PV-4 Shew_0656 -120 5.3 AAGTGTAAAAATGACAATA
-96 4.4 TACTGTTAAATTGACATAT
Shewanella pealeana ATCC 700345 Spea_3444 -154 4.7 AAGTGTAAAATTGACATTG
-119 4.1 TACTGTTAAAAAGACACAC
Shewanella halifaxensis HAW-EB4 Shal_3555 -86 4.3 TACTGTAAAAAAGACAGCA
Shewanella piezotolerans WP3 swp_0832 -105 4.2 AACAGTATATTTGACACTG
-72 4.9 TAATGTCAAAAAGACAAAA
Shewanella sediminis HAW-EB3 Ssed_3823 -160 4.1 TTTTGTATTTATGACAGCA
-136 5.2 AAATGTCAATATGACAAGC
Shewanella woodyi ATCC 51908 Swoo_0760 -62 5.2 GATTGTCAAAATGACATAC
-37 4.1 TATGGTCATATTCAAACCA
Position: -188
Score: 4.6
Sequence: AGGTGTCTTATTGACAGCT
Position: -10
Score: 4.9
Sequence: AGGTGACAATATGACAATC
Locus tag: Spea_3652
Spea_3652 -188 4.6 AGGTGTCTTATTGACAGCT
-10 4.9 AGGTGACAATATGACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: norV
Ortholog function: Anaerobic nitric oxide reductase flavorubredoxin
Shewanella pealeana ATCC 700345 Spea_3652 -237 4 TATAGTCGTTTGGTCACTG
-188 4.6 AGGTGTCTTATTGACAGCT
-169 4.3 ATATGTCACTTTGACATTT
-145 3.8 CGCTATCAAAAAGACAGTG
Shewanella halifaxensis HAW-EB4 Shal_3740 -188 4.8 GACTGTCTTAATGACATTT
-168 4.9 TACGGTCATTTTGACTGTT
-144 4 TGCTATCAAAAAGACATTG