Propagation of NorR regulog to Shewanella pealeana ATCC 700345
| Source regulog: | NorR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella pealeana ATCC 700345 |
| Orthologous TF(s) | Spea_3444 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -154
Score: 4.7 Sequence: AAGTGTAAAATTGACATTG
Locus tag: Spea_3444
|
||||
| Spea_3444 | -154 | 4.7 | AAGTGTAAAATTGACATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: norR | ||||
| Ortholog function: anaerobic nitric oxide reductase transcription regulator, Fis family | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_3073 | -50 | 4.6 | CTGTGTCAATATCACAATT |
| Shewanella sp W3-18-1 | Sputw3181_0872 | -50 | 4.6 | CTGTGTCAATATCACAATT |
| Shewanella sp ANA-3 | Shewana3_0845 | -166 | 3.7 | AGGTGTCGTTTAGGCACCT |
| -58 | 4.6 | CTGTGTCAATATAACAATC | ||
| Shewanella sp MR-4 | Shewmr4_3090 | -167 | 3.7 | AGGTGTCGTTTAGGCACCT |
| -58 | 4.6 | CTGTGTCAATATAACAATC | ||
| Shewanella sp MR-7 | Shewmr7_0882 | -166 | 3.7 | AGGTGTCGTTTAGGCACCT |
| -58 | 4.6 | CTGTGTCAATATAACAATC | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_3254 | -58 | 4.4 | TGTTGTTATATTCACACTT |
| -43 | 5 | ACTTGTCATAATGACATCA | ||
| Shewanella amazonensis SB2B | Sama_0727 | -76 | 5 | CCATGTCAAAATGACAATT |
| Shewanella loihica PV-4 | Shew_0656 | -120 | 5.3 | AAGTGTAAAAATGACAATA |
| -96 | 4.4 | TACTGTTAAATTGACATAT | ||
| Shewanella pealeana ATCC 700345 | Spea_3444 | -154 | 4.7 | AAGTGTAAAATTGACATTG |
| -119 | 4.1 | TACTGTTAAAAAGACACAC | ||
| Shewanella halifaxensis HAW-EB4 | Shal_3555 | -86 | 4.3 | TACTGTAAAAAAGACAGCA |
| Shewanella piezotolerans WP3 | swp_0832 | -105 | 4.2 | AACAGTATATTTGACACTG |
| -72 | 4.9 | TAATGTCAAAAAGACAAAA | ||
| Shewanella sediminis HAW-EB3 | Ssed_3823 | -160 | 4.1 | TTTTGTATTTATGACAGCA |
| -136 | 5.2 | AAATGTCAATATGACAAGC | ||
| Shewanella woodyi ATCC 51908 | Swoo_0760 | -62 | 5.2 | GATTGTCAAAATGACATAC |
| -37 | 4.1 | TATGGTCATATTCAAACCA | ||
|
Position: -188
Score: 4.6 Sequence: AGGTGTCTTATTGACAGCT
Position: -10
Score: 4.9 Sequence: AGGTGACAATATGACAATC
Locus tag: Spea_3652
|
||||
| Spea_3652 | -188 | 4.6 | AGGTGTCTTATTGACAGCT | |
| -10 | 4.9 | AGGTGACAATATGACAATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: norV | ||||
| Ortholog function: Anaerobic nitric oxide reductase flavorubredoxin | ||||
| Shewanella pealeana ATCC 700345 | Spea_3652 | -237 | 4 | TATAGTCGTTTGGTCACTG |
| -188 | 4.6 | AGGTGTCTTATTGACAGCT | ||
| -169 | 4.3 | ATATGTCACTTTGACATTT | ||
| -145 | 3.8 | CGCTATCAAAAAGACAGTG | ||
| Shewanella halifaxensis HAW-EB4 | Shal_3740 | -188 | 4.8 | GACTGTCTTAATGACATTT |
| -168 | 4.9 | TACGGTCATTTTGACTGTT | ||
| -144 | 4 | TGCTATCAAAAAGACATTG | ||