Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SO1578 regulog to Shewanella oneidensis MR-1

Reference regulog properties
Source regulog: SO1578 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Glutathione metabolism
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella oneidensis MR-1
Orthologous TF(s) SO1578
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Shewanella oneidensis MR-1
Locus tag Position Score Sequence
Position: -63
Score: 6.6
Sequence: CTAACCGATCGTTCCGTTAA
Locus tag: SO1577
SO1577 -63 6.6 CTAACCGATCGTTCCGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1577
Ortholog function: Glutathione S-transferase (EC 2.5.1.18)
Shewanella oneidensis MR-1 SO_1577 -63 6.6 CTAACCGATCGTTCCGTTAA
Shewanella sp ANA-3 Shewana3_2865 -63 6.6 CTAACCGATCGTTCCGTTAA
Shewanella sp MR-4 Shewmr4_2695 -63 6.6 CTAACCGATCGTTCCGTTAA
Shewanella sp MR-7 Shewmr7_2763 -63 6.7 CTAACCGAACGTTCCGTTAA
Shewanella baltica OS155 Sbal_1394 -110 5 TTGACTGATCGTTTAGATAT
-75 6.6 CTAACCGATCGTTCCGTTAA
Shewanella amazonensis SB2B Sama_1088 -66 5.5 TTGACCGTTCGTTCAGTTAT
-31 6.2 CTAACCGATCGTTCAGATAA
Shewanella loihica PV-4 Shew_2730 -114 6.1 TTGACCGAACGTTCAGTTAT
-79 5.6 CTAAACGAGCGTTCAGTTAA
Shewanella woodyi ATCC 51908 Swoo_3434 -97 5 TTGACCGAACGTTTAGCTAT
-62 6.6 CTAACCGATCGTTCAGTTAA
Position: -112
Score: 6.6
Sequence: TTAACGGAACGATCGGTTAG
Locus tag: SO1578
SO1578 -112 6.6 TTAACGGAACGATCGGTTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1578
Ortholog function: Transcriptional regulator, TetR family
Shewanella oneidensis MR-1 SO_1578 -112 6.6 TTAACGGAACGATCGGTTAG
Shewanella sp ANA-3 Shewana3_2864 -112 6.6 TTAACGGAACGATCGGTTAG
Shewanella sp MR-4 Shewmr4_2694 -112 6.6 TTAACGGAACGATCGGTTAG
Shewanella sp MR-7 Shewmr7_2762 -111 6.7 TTAACGGAACGTTCGGTTAG
Shewanella baltica OS155 Sbal_1395 -157 6.6 TTAACGGAACGATCGGTTAG
-122 5 ATATCTAAACGATCAGTCAA
Shewanella amazonensis SB2B Sama_1089 -103 6.2 TTATCTGAACGATCGGTTAG
-68 5.5 ATAACTGAACGAACGGTCAA
Shewanella loihica PV-4 Shew_2729 -101 5.6 TTAACTGAACGCTCGTTTAG
-66 6.1 ATAACTGAACGTTCGGTCAA
Shewanella woodyi ATCC 51908 Swoo_3433 -90 6.6 TTAACTGAACGATCGGTTAG
-55 5 ATAGCTAAACGTTCGGTCAA