Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NmlR regulog to Shewanella oneidensis MR-1

Reference regulog properties
Source regulog: NmlR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator
Biological process: Carbonyl stress response
Effector: Diamide
Phylum: Proteobacteria/Gamma
Propagated regulon:
Target genome Shewanella oneidensis MR-1
Orthologous TF(s) SO0082
Regulated genes 1
Built upon 5 sites [see more]
Predicted regulatory interactions in Shewanella oneidensis MR-1
Locus tag Position Score Sequence
Position: -60
Score: 6.8
Sequence: CTTAGAGCTAACTCTAAG
Locus tag: SO0083
SO0083 -60 6.8 CTTAGAGCTAACTCTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pcaC
Ortholog function: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
Shewanella oneidensis MR-1 SO_0083 -60 6.8 CTTAGAGCTAACTCTAAG
Shewanella sp MR-4 Shewmr4_0089 -57 6.8 CTTAGAGTGAACTCTAAG
Shewanella baltica OS155 Sbal_4266 -58 7.1 CTTAGAGTTAACTCTAAG
Shewanella frigidimarina NCIMB 400 Sfri_3873 -58 6.8 CTTAGAGTTAACTCTAAC
Shewanella woodyi ATCC 51908 Swoo_4049 -57 7.1 CTTAGAGTTAACTCTAAG
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