Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrtR regulog to Shewanella oneidensis MR-1

Reference regulog properties
Source regulog: NrtR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: NrtR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Adenosine diphosphate ribose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella oneidensis MR-1
Orthologous TF(s) SO1979
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Shewanella oneidensis MR-1
Locus tag Position Score Sequence
Position: -170
Score: 6.9
Sequence: ATAGTGTCTAAAAGACACTAT
Locus tag: SO1980
SO1980 -170 6.9 ATAGTGTCTAAAAGACACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: prs
Ortholog function: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)
Shewanella oneidensis MR-1 SO_1980 -170 6.9 ATAGTGTCTAAAAGACACTAT
-84 6.6 ATAATGTCTTTAAGACACTAT
Shewanella putrefaciens CN-32 Sputcn32_2327 -170 6.7 ATAGTGTCTAAAGGACACTAT
-84 6.6 ATAATGTCTTTAAGACACTAT
Shewanella sp W3-18-1 Sputw3181_1681 -170 6.7 ATAGTGTCTAAAGGACACTAT
-84 6.6 ATAATGTCTTTAAGACACTAT