Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HypR regulog to Shewanella amazonensis SB2B

Reference regulog properties
Source regulog: HypR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Proline and 4-hydrohyproline utilization
Effector: Proline; 4-hydroxyproline
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella amazonensis SB2B
Orthologous TF(s) Sama_1528
Regulated genes 5
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Shewanella amazonensis SB2B
Locus tag Position Score Sequence
Position: -38
Score: 5
Sequence: ATTGCATACAAT
Locus tag: Sama_1077
Sama_1077 -38 5 ATTGCATACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: colA1
Ortholog function: Microbial collagenase, secreted (EC 3.4.24.3)
Shewanella amazonensis SB2B Sama_1077 -38 5 ATTGCATACAAT
Shewanella loihica PV-4 Shew_2743 -51 5 ATTTTATACAAA
Shewanella pealeana ATCC 700345