Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraR regulog to Shewanella putrefaciens 200

Reference regulog properties
Source regulog: AraR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella putrefaciens 200
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 30 sites [see more]
Predicted regulatory interactions in Shewanella putrefaciens 200
Locus tag Position Score Sequence
Position: -80
Score: 6.1
Sequence: TAGTAGTATTGTAGTACTA
Locus tag: Sput200DRAFT_3000
Sput200DRAFT_3000 -80 6.1 TAGTAGTATTGTAGTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Shewanella putrefaciens CN-32 Sputcn32_2068 -107 5.3 AAATAATATTGTAATACCA
-80 6.1 TAGTAGTATTGTAGTACTA
Shewanella sp W3-18-1 Sputw3181_1944 -107 5.3 AAATAATATTGTAATACCA
-80 6.1 TAGTAGTATTGTAGTACTA
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