Propagation of NtrC regulog to Marinobacter sp. ELB17
| Source regulog: | NtrC - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Marinobacter sp. ELB17 |
| Orthologous TF(s) | MELB17_20036 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -292
Score: 5.3 Sequence: CGCACAAATGTGGTGCA
Locus tag: MELB17_20021
|
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| MELB17_20021 | -292 | 5.3 | CGCACAAATGTGGTGCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: glutamine synthetase, type I | ||||
| Shewanella oneidensis MR-1 | SO_4410 | -246 | 4.6 | TGCACTAAAATGGGGGA |
| -179 | 5.4 | TGCACCAACACAGTGCA | ||
| Shewanella putrefaciens CN-32 | Sputcn32_0412 | -184 | 5.4 | CGCACCATCATAGTGCA |
| Shewanella sp W3-18-1 | Sputw3181_0266 | -184 | 5.6 | CGCACCATTATAGTGCA |
| Shewanella sp ANA-3 | Shewana3_0300 | -247 | 4.6 | TGCACTAAAATGGTGTT |
| -180 | 5.6 | CGCACCAATATAGTGCA | ||
| Shewanella sp MR-4 | Shewmr4_0305 | -247 | 4.6 | TGCACTAAAATGGTGTT |
| -180 | 5.8 | AGCACCAATATGGTGCA | ||
| Shewanella sp MR-7 | Shewmr7_3719 | -183 | 5.6 | AGCACCAACATGGTGCA |
| Shewanella baltica OS155 | Sbal_0306 | -183 | 5.5 | AGCACCATAGTGGTGCA |
| Shewanella denitrificans OS217 | Sden_3454 | -251 | 5.7 | TGCACCATAACGGTGCG |
| -228 | 5 | TGCACCATTATGGTGAT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_0325 | -197 | 5.4 | TGCACGAGGTTGGTGCA |
| Shewanella amazonensis SB2B | Sama_3416 | -244 | 4.9 | TGCACCTTTATCATGCA |
| -214 | 5.1 | CGCACCAACATTGTGCG | ||
| -192 | 5.5 | TGCCCCGATTTGGTGCA | ||
| Shewanella loihica PV-4 | Shew_3554 | -217 | 5.4 | CGCACCATATTGGTGAA |
| -178 | 5.9 | TGCACCTTTATGGTGCA | ||
| Shewanella pealeana ATCC 700345 | Spea_3916 | -202 | 4.7 | TGCACCATATAGATCCA |
| -180 | 5.8 | CGCACCAAAATGGTGCG | ||
| Shewanella halifaxensis HAW-EB4 | Shal_0353 | -180 | 5.4 | CGCACCAAAATAGTGCG |
| Shewanella piezotolerans WP3 | swp_0268 | -218 | 4.7 | TGCACGATTATGAAGCA |
| -201 | 4.8 | CGCACCAAAATGATCCA | ||
| -179 | 4.9 | CGCACCATTAGAGTGCA | ||
| Shewanella sediminis HAW-EB3 | Ssed_0292 | -227 | 4.7 | CGCACCAGCTTGGTGAG |
| -188 | 5.5 | CGCACCAACTTAGTGCA | ||
| Shewanella woodyi ATCC 51908 | Swoo_4643 | -216 | 4.7 | CGCACCAGGATGGTGAG |
| -199 | 5 | CGCACCATTATCGGGCA | ||
| -177 | 5.4 | CGCACCAAACTAGTGCA | ||