Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BirA regulog to Marinobacter aqueolei

Reference regulog properties
Source regulog: BirA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Marinobacter aqueolei
Orthologous TF(s) Maqu_0702
Regulated genes 1
Built upon 32 sites [see more]
Predicted regulatory interactions in Marinobacter aqueolei
Locus tag Position Score Sequence
Position: -41
Score: 7.5
Sequence: CCGTAAACC-(14)-GGTTAACAG
Locus tag: Maqu_2756
Maqu_2756 -41 7.5 CCGTAAACC-(14)-GGTTAACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioB
Ortholog function: Biotin synthase (EC 2.8.1.6)
Shewanella oneidensis MR-1 SO_2740 -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella putrefaciens CN-32 Sputcn32_2345 -90 7.5 TAGTAAACT-(15)-CGTTGACAG
Shewanella sp W3-18-1 Sputw3181_1663 -90 7.5 TAGTAAACT-(15)-CGTTGACAG
Shewanella sp ANA-3 Shewana3_2519 -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella sp MR-4 Shewmr4_2359 -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella sp MR-7 Shewmr7_2431 -89 7.8 TGGTAAACC-(15)-CGTTGACAG
Shewanella baltica OS155 Sbal_1758 -89 7.5 TAGTAAACT-(15)-CGTTGACAG
Shewanella denitrificans OS217 Sden_1658 -86 6.8 TaGTcAAgt-(15)-cGTTgACAg
Shewanella frigidimarina NCIMB 400 Sfri_1475 -87 7.3 TAGTAAAGC-(15)-CGTTGACAG
Shewanella amazonensis SB2B Sama_1438 -86 7.8 CAGTAAACC-(15)-CGTTGACAG
Shewanella loihica PV-4 Shew_1719 -122 8 TAGTAAACC-(15)-CGTTGACAG
Shewanella pealeana ATCC 700345 Spea_1801 -238 7.3 TAGTAAACC-(15)-CATTGACAG
Shewanella halifaxensis HAW-EB4 Shal_2477 -236 7.3 TAGTAAACC-(15)-CATTGACAG
Shewanella piezotolerans WP3 swp_2928 -242 7.3 TAGTAAACC-(15)-CATTGACAG
Shewanella sediminis HAW-EB3 Ssed_2776 -99 8 TAGTAAACC-(15)-CGTTGACAG
Shewanella woodyi ATCC 51908 Swoo_1866 -99 8 TAGTAAACC-(15)-CGTTGACAG
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