Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Teredinibacter turnerae T7901

Reference regulog properties
Source regulog: LexA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Teredinibacter turnerae T7901
Orthologous TF(s) TERTU_1938
Regulated genes 6
Built upon 192 sites [see more]
Predicted regulatory interactions in Teredinibacter turnerae T7901
Locus tag Position Score Sequence
Position: -88
Score: 5.7
Sequence: TACTGTACAAACAAACAGTA
Locus tag: TERTU_0430
TERTU_0430 -88 5.7 TACTGTACAAACAAACAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yebG
Ortholog function: SOS regulon DNA damage-inducible protein
Shewanella oneidensis MR-1 SO_2604 -31 6 TACTGTATATAAAAACAGTG
Shewanella putrefaciens CN-32 Sputcn32_2205 -30 6 TACTGTATATAAAAACAGTG
Shewanella sp W3-18-1 Sputw3181_1804 -30 6 TACTGTATATAAAAACAGTG
Shewanella sp ANA-3 Shewana3_1775 -31 6 TACTGTATATAAAAACAGTG
Shewanella sp MR-4 Shewmr4_1670 -31 6 TACTGTATATAAAAACAGTG
Shewanella sp MR-7 Shewmr7_1745 -31 6 TACTGTATATAAAAACAGTG
Shewanella baltica OS155 Sbal_2450 -31 6 TACTGTATATAAAAACAGTG
Shewanella denitrificans OS217 Sden_1719 -31 6 CACTGTATATAAAAACAGTA
Shewanella frigidimarina NCIMB 400 Sfri_2231 -31 5.9 CACTGTATATAAAAACAGTG
Shewanella amazonensis SB2B Sama_1582 -31 5.8 CACTGTATAAATAAACAGTG
Shewanella loihica PV-4 Shew_1799 -31 5.7 AACTGTATATAAAAACAGTG
Shewanella pealeana ATCC 700345 Spea_1932 -31 5.9 CACTGTATATAAAAACAGTG
Shewanella halifaxensis HAW-EB4 Shal_2367 -31 6 TACTGTATATAAAAACAGTG
Shewanella piezotolerans WP3 swp_2821 11 6 TACTGTATATAAAAACAGTG
Shewanella sediminis HAW-EB3 Ssed_2486 -31 5.9 AACTGTATATAAAAACAGTA
Shewanella woodyi ATCC 51908 Swoo_2130 -31 5.9 AACTGTATATAAAAACAGTA
Position: -75
Score: 5.2
Sequence: TACTGTATAAACAAACAGAT
Locus tag: TERTU_1938
TERTU_1938 -75 5.2 TACTGTATAAACAAACAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response repressor and protease LexA (EC 3.4.21.88)
Shewanella oneidensis MR-1 SO_4603 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella putrefaciens CN-32 Sputcn32_3780 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp W3-18-1 Sputw3181_0135 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp ANA-3 Shewana3_3989 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp MR-4 Shewmr4_3789 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella sp MR-7 Shewmr7_3862 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella baltica OS155 Sbal_0156 -45 5.9 TACTGTATATACTAACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella denitrificans OS217 Sden_3515 -45 5.1 TACTGTATATAATGACAGTC
-26 5.1 CACTGTATAAAAAGACAGGA
Shewanella frigidimarina NCIMB 400 Sfri_0260 -45 5 CACTGTATATAATGACAGTC
-26 5.1 CACTGTATAAAAAGACAGGA
Shewanella amazonensis SB2B Sama_3481 -45 5.6 TACTGTATATACTGACAGTA
-26 5 AACTGTATAGAAAAACAGGA
Shewanella loihica PV-4 Shew_0127 -45 4.9 TACTGTATATACTGACAGGT
-26 4.8 TACTGTATGGAAAGACAGGA
Shewanella pealeana ATCC 700345 Spea_3997 -45 5.2 TACTGTATATACTAACAGGT
-26 4.9 TACTGTATAGAAAGACAGGG
Shewanella halifaxensis HAW-EB4 Shal_0260 -45 4.9 TACTGTATATACTGACAGGT
-26 4.9 TACTGTATAGAAAGACAGGG
Shewanella piezotolerans WP3 swp_4821 -45 5.2 TACTGTATATACTAACAGGT
-26 5 TACTGTATAGAAAAACAGGT
Shewanella sediminis HAW-EB3 Ssed_0200 -45 5.6 TACTGTATATACTAACAGTT
-26 5 TACTGTATAGAAAGACAGGA
Shewanella woodyi ATCC 51908 Swoo_0180 -45 5.3 TACTGTATATACTGACAGTT
-26 5 TACTGTATAGAAAGACAGGA
© 2009-2020 RegPrecise