Propagation of NagR regulog to Colwellia psychrerythraea 34H
| Source regulog: | NagR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Colwellia psychrerythraea 34H |
| Orthologous TF(s) | CPS_1019 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -138
Score: 6 Sequence: AATGACAGCGCTGTCAAT
Locus tag: CPS_1019
|
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| CPS_1019 | -138 | 6 | AATGACAGCGCTGTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagR | ||||
| Ortholog function: Transcriptional regulator of N-acetylglucosamine utilization, LacI family | ||||
| Shewanella sp ANA-3 | Shewana3_3122 | -96 | 5.1 | GCTGACAACGCTGTCGGC |
| Shewanella sp MR-4 | Shewmr4_2943 | -96 | 5.1 | GCTGACAACGCTGTCGGC |
| Shewanella sp MR-7 | Shewmr7_3025 | -96 | 5.1 | GCTGACAACGCTGTCGGC |
| Shewanella denitrificans OS217 | Sden_2709 | -301 | 6.2 | AATGACAACGCTGTCATG |
|
Position: -70
Score: 6.4 Sequence: AATGACAACGCTGTCATT
Locus tag: CPS_1026
|
||||
| CPS_1026 | -70 | 6.4 | AATGACAACGCTGTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagK | ||||
| Ortholog function: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59) | ||||
| Shewanella oneidensis MR-1 | SO_3507 | -115 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella putrefaciens CN-32 | Sputcn32_1076 | -90 | 6.4 | AATGACAACGCTGTCATC |
| Shewanella sp W3-18-1 | Sputw3181_3089 | -90 | 6.4 | AATGACAACGCTGTCATC |
| Shewanella sp ANA-3 | Shewana3_3114 | -114 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella sp MR-4 | Shewmr4_2935 | -114 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella sp MR-7 | Shewmr7_3017 | -114 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella baltica OS155 | Sbal_1084 | -113 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella denitrificans OS217 | Sden_2706 | -101 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella amazonensis SB2B | Sama_0944 | -105 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella loihica PV-4 | Shew_1116 | -106 | 6.4 | AATGACAGCGTTGTCATT |
| Shewanella pealeana ATCC 700345 | Spea_1101 | -123 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella halifaxensis HAW-EB4 | Shal_1149 | -124 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella piezotolerans WP3 | swp_3703 | -106 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella sediminis HAW-EB3 | Ssed_1212 | -106 | 6.4 | AATGACAACGCTGTCATT |
| Shewanella woodyi ATCC 51908 | Swoo_1312 | -108 | 6.4 | AATGACAACGCTGTCATT |