Propagation of SO1393 regulog to Shewanella sp MR-7
| Source regulog: | SO1393 - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella sp MR-7 |
| Orthologous TF(s) | Shewmr7_2884 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -63
Score: 6.5 Sequence: AGTAGACTGAGTTGTCTACC
Locus tag: Shewmr7_2884
|
||||
| Shewmr7_2884 | -63 | 6.5 | AGTAGACTGAGTTGTCTACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1393 | ||||
| Ortholog function: Transcriptional regulator, TetR family | ||||
| Shewanella oneidensis MR-1 | SO_1393 | -129 | 5.1 | AGTAGACAGATTTGTCTGTA |
| -91 | 6.6 | AGTAGACTGATTTGTCTACT | ||
| Shewanella sp ANA-3 | Shewana3_2980 | -98 | 5.9 | GGTAGACCAATCTGTCTGCT |
| -63 | 6.5 | GGTAGACTGAGTTGTCTACC | ||
| Shewanella sp MR-4 | Shewmr4_2801 | -98 | 6 | GGTAGACCAGTCTGTCTACC |
| -63 | 6.5 | AGTAGACTGAGTTGTCTACC | ||
| Shewanella sp MR-7 | Shewmr7_2884 | -98 | 5.6 | TGTAGACCAGTCTGTCTACT |
| -63 | 6.5 | AGTAGACTGAGTTGTCTACC | ||
| Shewanella loihica PV-4 | Shew_1679 | -77 | 5.7 | TGTAGACAAGTCTGTCTACC |
| -51 | 6.5 | AGTAGACAACTTGGTCTACC | ||
|
Position: -208
Score: 6.5 Sequence: GGTAGACAACTCAGTCTACT
Locus tag: Shewmr7_2885
|
||||
| Shewmr7_2885 | -208 | 6.5 | GGTAGACAACTCAGTCTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1392 | ||||
| Ortholog function: hypothetical HPP domain-containing protein | ||||
| Shewanella oneidensis MR-1 | SO_1392 | -203 | 6.6 | AGTAGACAAATCAGTCTACT |
| -165 | 5.1 | TACAGACAAATCTGTCTACT | ||
| Shewanella sp ANA-3 | Shewana3_2981 | -208 | 6.5 | GGTAGACAACTCAGTCTACC |
| -173 | 5.9 | AGCAGACAGATTGGTCTACC | ||
| Shewanella sp MR-4 | Shewmr4_2802 | -208 | 6.5 | GGTAGACAACTCAGTCTACT |
| -173 | 6 | GGTAGACAGACTGGTCTACC | ||
| Shewanella sp MR-7 | Shewmr7_2885 | -208 | 6.5 | GGTAGACAACTCAGTCTACT |
| -173 | 5.6 | AGTAGACAGACTGGTCTACA | ||
| Shewanella loihica PV-4 | Shew_1680 | -97 | 6.5 | GGTAGACCAAGTTGTCTACT |
| -71 | 5.7 | GGTAGACAGACTTGTCTACA | ||