Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ScrR regulog to Shewanella sp MR-7

Reference regulog properties
Source regulog: ScrR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sucrose utilization
Effector: Sucrose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sp MR-7
Orthologous TF(s) Shewmr7_0061
Regulated genes 3
Built upon 16 sites [see more]
Predicted regulatory interactions in Shewanella sp MR-7
Locus tag Position Score Sequence
Position: -88
Score: 7.1
Sequence: AACTTAATCGATTAAGTT
Locus tag: Shewmr7_0062
Shewmr7_0062 -88 7.1 AACTTAATCGATTAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrP
Ortholog function: Sucrose phosphorylase (EC 2.4.1.7)
Shewanella sp ANA-3 Shewana3_0066 -88 7.1 AACTTAATCGATTAAGTT
Shewanella sp MR-4 Shewmr4_0064 -88 7.1 AACTTAATCGATTAAGTT
Shewanella sp MR-7 Shewmr7_0062 -88 7.1 AACTTAATCGATTAAGTT
Shewanella baltica OS155 Sbal_4288 -88 7.1 AACTTAATCGATTAAGTT
Shewanella frigidimarina NCIMB 400 Sfri_3990 -50 7.1 AACTTAATCGATTAAGTT
Position: -186
Score: 7.1
Sequence: AACTTAATCGATTAAGTT
Locus tag: Shewmr7_0063
Shewmr7_0063 -186 7.1 AACTTAATCGATTAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrT
Ortholog function: Predicted sucrose permease, MFS family, FucP subfamily
Shewanella sp ANA-3 Shewana3_0067 -186 7.1 AACTTAATCGATTAAGTT
Shewanella sp MR-4 Shewmr4_0065 -186 7.1 AACTTAATCGATTAAGTT
Shewanella sp MR-7 Shewmr7_0063 -186 7.1 AACTTAATCGATTAAGTT
Shewanella baltica OS155 Sbal_4287 -190 7.1 AACTTAATCGATTAAGTT
Shewanella frigidimarina NCIMB 400 Sfri_3989 -156 7.1 AACTTAATCGATTAAGTT
Position: -124
Score: 6.9
Sequence: AACTTAATCGATTAAGAT
Locus tag: Shewmr7_0064
Shewmr7_0064 -124 6.9 AACTTAATCGATTAAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp(Scr)
Ortholog function: Predicted sucrose-specific TonB-dependent receptor
Shewanella sp ANA-3 Shewana3_0068 -125 6.9 AACTTAATCGATTAAGAT
Shewanella sp MR-4 Shewmr4_0066 -124 6.9 AACTTAATCGATTAAGAT
Shewanella sp MR-7 Shewmr7_0064 -124 6.9 AACTTAATCGATTAAGAT
Shewanella baltica OS155 Sbal_4286 -143 7.1 AACTTAATCGATTAAGTT
Shewanella frigidimarina NCIMB 400 Sfri_3988 -147 6.8 AACTTAATCGATTAAGTC
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