Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NorR regulog to Shewanella sp MR-7

Reference regulog properties
Source regulog: NorR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sp MR-7
Orthologous TF(s) Shewmr7_0882
Regulated genes 2
Built upon 91 sites [see more]
Predicted regulatory interactions in Shewanella sp MR-7
Locus tag Position Score Sequence
Position: -58
Score: 4.6
Sequence: CTGTGTCAATATAACAATC
Locus tag: Shewmr7_0882
Shewmr7_0882 -58 4.6 CTGTGTCAATATAACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: norR
Ortholog function: anaerobic nitric oxide reductase transcription regulator, Fis family
Shewanella putrefaciens CN-32 Sputcn32_3073 -50 4.6 CTGTGTCAATATCACAATT
Shewanella sp W3-18-1 Sputw3181_0872 -50 4.6 CTGTGTCAATATCACAATT
Shewanella sp ANA-3 Shewana3_0845 -166 3.7 AGGTGTCGTTTAGGCACCT
-58 4.6 CTGTGTCAATATAACAATC
Shewanella sp MR-4 Shewmr4_3090 -167 3.7 AGGTGTCGTTTAGGCACCT
-58 4.6 CTGTGTCAATATAACAATC
Shewanella sp MR-7 Shewmr7_0882 -166 3.7 AGGTGTCGTTTAGGCACCT
-58 4.6 CTGTGTCAATATAACAATC
Shewanella frigidimarina NCIMB 400 Sfri_3254 -58 4.4 TGTTGTTATATTCACACTT
-43 5 ACTTGTCATAATGACATCA
Shewanella amazonensis SB2B Sama_0727 -76 5 CCATGTCAAAATGACAATT
Shewanella loihica PV-4 Shew_0656 -120 5.3 AAGTGTAAAAATGACAATA
-96 4.4 TACTGTTAAATTGACATAT
Shewanella pealeana ATCC 700345 Spea_3444 -154 4.7 AAGTGTAAAATTGACATTG
-119 4.1 TACTGTTAAAAAGACACAC
Shewanella halifaxensis HAW-EB4 Shal_3555 -86 4.3 TACTGTAAAAAAGACAGCA
Shewanella piezotolerans WP3 swp_0832 -105 4.2 AACAGTATATTTGACACTG
-72 4.9 TAATGTCAAAAAGACAAAA
Shewanella sediminis HAW-EB3 Ssed_3823 -160 4.1 TTTTGTATTTATGACAGCA
-136 5.2 AAATGTCAATATGACAAGC
Shewanella woodyi ATCC 51908 Swoo_0760 -62 5.2 GATTGTCAAAATGACATAC
-37 4.1 TATGGTCATATTCAAACCA
Position: -174
Score: 5
Sequence: AGCTGTCATAAAGACAATA
Position: -156
Score: 5
Sequence: AGCTGTCATATCGACAACA
Position: -131
Score: 4.7
Sequence: CAGTATCAAAAAGACAATA
Locus tag: Shewmr7_0883
Shewmr7_0883 -174 5 AGCTGTCATAAAGACAATA
-156 5 AGCTGTCATATCGACAACA
-131 4.7 CAGTATCAAAAAGACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: norB
Ortholog function: Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
Shewanella putrefaciens CN-32 Sputcn32_3072 -190 3.9 GATTGTTTTAAAGACACAA
-162 4.9 TAGTGTCATAAAAACAATA
-144 5.7 AATTGTCATTATGACACTT
-120 4.1 ACGTATCAAAAAGACACTC
Shewanella sp W3-18-1 Sputw3181_0873 -190 3.9 GATTGTTTTAAAGACACAA
-162 4.9 TAGTGTCATAAAAACAATA
-144 5.7 AATTGTCATTATGACACTT
-120 4.1 ACGTATCAAAAAGACACTC
Shewanella sp ANA-3 Shewana3_0846 -203 3.6 CATTGTGTTATCGACATAC
-174 4.9 AGCTGTCATAAAGACAATC
-156 4.5 CACTGTCATATCAACAATC
-131 4.6 CAGTATCAAAAAGACAATC
Shewanella sp MR-4 Shewmr4_3089 -203 4 CATTGTGTTATCGACATTC
-174 4.5 AGCTGTCACAAAGACAATA
-156 5.4 AACTGTCATATCGACAATA
-131 4.6 CAGTATCAAAAAGACAATT
-33 3.6 ACGTATCAAAATGACGTTG
Shewanella sp MR-7 Shewmr7_0883 -203 4 CATTGTGTTATCGACATTC
-174 5 AGCTGTCATAAAGACAATA
-156 5 AGCTGTCATATCGACAACA
-131 4.7 CAGTATCAAAAAGACAATA
Shewanella frigidimarina NCIMB 400 Sfri_3253 -181 4.7 CGCTGTCATTTCGACATTA
-162 4.7 AATAGTCTTATTGACACAT
-138 4.7 ATGTGTCAATAAGACTATT
Shewanella amazonensis SB2B Sama_0728 -169 4.8 TAGTGTCATTTATACAATT
-149 4.5 AAATGTCTTTATGACATCA
Shewanella loihica PV-4 Shew_0657 -204 4.2 AAGTATCAAATCGACACAG
-175 4.5 CACTGTCTTTTTGACACGC
-157 4.6 CGGTGTCATTTTTACACTT
-132 5.9 GATTGTCATTATGACAATT
Shewanella halifaxensis HAW-EB4 Shal_3554 -186 4.5 AGATGTCAATTCGACAAAG
-165 4.1 CGTTATCAAATAGACAGCT
-142 5.3 CACAGTCAAAATGACAACA
Shewanella piezotolerans WP3 swp_0833 -173 5.2 CATTGTCAAAAAGACACTT
-155 4.8 TAGTGTCATATGGACACAC
-131 5.1 CATTGTCTTTATGACAACC
Shewanella sediminis HAW-EB3 Ssed_3822 -171 4.9 AAGTGTAAAAATGACACTG
-153 4.3 GGCTGTTATTAAGACACTA
-129 4.5 GGGTGTCCTAATGACACAA
Shewanella woodyi ATCC 51908 Swoo_0761 -199 4 ATCAGTCATATTGATATTC
-172 4.9 AGCTGTCATTTAGACACTA
-154 5.1 AACTGTCATTTTTACAATA
-130 5 CATAGTCATAATGACACAT
© 2009-2020 RegPrecise