Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ManR1 regulog to Shewanella sp MR-7

Reference regulog properties
Source regulog: ManR1 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Mannose utilization; Mannosides utilization
Effector: Mannose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sp MR-7
Orthologous TF(s) Shewmr7_3383
Regulated genes 2
Built upon 4 sites [see more]
Predicted regulatory interactions in Shewanella sp MR-7
Locus tag Position Score Sequence
Position: -103
Score: 6.7
Sequence: TTTTTGGAACGTTCCAATTT
Locus tag: Shewmr7_3383
Shewmr7_3383 -103 6.7 TTTTTGGAACGTTCCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: manR1
Ortholog function: Transcriptional regulator of mannoside utilization, LacI family
Shewanella sp MR-7 Shewmr7_3383 -103 6.7 TTTTTGGAACGTTCCAATTT
Shewanella amazonensis SB2B Sama_0565 -103 7.1 CAATTGGAACGTTCCAATTT
Position: -76
Score: 6.7
Sequence: AAATTGGAACGTTCCAAAAA
Locus tag: Shewmr7_3384
Shewmr7_3384 -76 6.7 AAATTGGAACGTTCCAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mnnA1
Ortholog function: Alpha-1,2-mannosidase
Shewanella sp MR-7 Shewmr7_3384 -76 6.7 AAATTGGAACGTTCCAAAAA
Shewanella amazonensis SB2B Sama_0564 -76 7.1 AAATTGGAACGTTCCAATTG