Propagation of AgaR regulog to Shewanella sp MR-4

Reference regulog properties
Source regulog:	AgaR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	N-acetylgalactosamine utilization
Effector:	N-acetylgalactosamine-6-phosphate; Galactosamine-6-phosphate
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Shewanella sp MR-4
Orthologous TF(s)	Shewmr4_2536
Regulated genes	2

Built upon 8 sites [see more]

Predicted regulatory interactions in *Shewanella sp MR-4*
	Locus tag	Position	Score	Sequence
Position: -71 Score: 6 Sequence: GAAAGTGTTTGAAAG Locus tag: Shewmr4_2536
	Shewmr4_2536	-71	6	GAAAGTGTTTGAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaR
Ortholog function: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family
Shewanella sp ANA-3	Shewana3_2702	-71	5.7	GAAAGTGTTTGAAGG
Shewanella sp MR-4	Shewmr4_2536	-71	6	GAAAGTGTTTGAAAG
Shewanella sp MR-7	Shewmr7_2603	-71	6	GAAAGTGTTTGAAAG
Shewanella amazonensis SB2B	Sama_1193	-67	5.6	GAAACCTATTGAAAG

Position: -157 Score: 6.1 Sequence: GAAACTTTTTGAAAG Locus tag: Shewmr4_2537
	Shewmr4_2537	-157	6.1	GAAACTTTTTGAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp_aga
Ortholog function: TonB-dependent receptor possibly related to N-acetylgalactosamine uptake through the outer membrane
Shewanella sp ANA-3	Shewana3_2703	-157	6.1	GAAACTTTTTGAAAG
Shewanella sp MR-4	Shewmr4_2537	-157	6.1	GAAACTTTTTGAAAG
Shewanella sp MR-7	Shewmr7_2604	-157	6.1	GAAACTTTTTGAAAG
Shewanella amazonensis SB2B	Sama_1192	-151	4.6	GAAAGAAAATAAAAG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --