Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GcvA regulog to Moritella sp. PE36

Reference regulog properties
Source regulog: GcvA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Moritella sp. PE36
Orthologous TF(s) PE36_06797
Regulated genes 5
Built upon 108 sites [see more]
Predicted regulatory interactions in Moritella sp. PE36
Locus tag Position Score Sequence
Position: -31
Score: 5.4
Sequence: ATTAGTTTTTCTCAT
Locus tag: PE36_06797
PE36_06797 -31 5.4 ATTAGTTTTTCTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvA
Ortholog function: Glycine cleavage system transcriptional activator GcvA
Shewanella oneidensis MR-1 SO_1533 -38 5.6 ATTAGAAAAACTAAT
Shewanella putrefaciens CN-32 Sputcn32_1282 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp W3-18-1 Sputw3181_2824 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp ANA-3 Shewana3_2894 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp MR-4 Shewmr4_2724 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp MR-7 Shewmr7_2795 -38 5.6 ATTAGAAAAACTAAT
Shewanella baltica OS155 Sbal_1364 -38 5.6 ATTAGAAAAACTAAT
Shewanella denitrificans OS217 Sden_2565 -54 5.2 ATTAGAAAAACTTAT
Shewanella frigidimarina NCIMB 400 Sfri_2783 -38 5.6 ATTAGAAAAACTAAT
Shewanella amazonensis SB2B Sama_2429 -38 5.6 ATTAGAAAAACTAAT
Shewanella loihica PV-4 Shew_2764 -38 5.6 ATTAGAAAAACTAAT
Shewanella pealeana ATCC 700345 Spea_2984 -38 5.6 ATTAGAAAAACTAAT
Shewanella halifaxensis HAW-EB4 Shal_3073 -38 5.6 ATTAGAAAAACTAAT
Shewanella piezotolerans WP3 swp_3612 -38 5.6 ATTAGAAAAACTAAT
Shewanella sediminis HAW-EB3 Ssed_3322 -38 5.6 ATTAGAAAAACTAAT
Shewanella woodyi ATCC 51908 Swoo_3471 -38 5.6 ATTAGAAAAACTAAT
Position: -348
Score: 4.9
Sequence: ATTAGTTATAGTAAT
Locus tag: PE36_20759
PE36_20759 -348 4.9 ATTAGTTATAGTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvT
Ortholog function: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Shewanella oneidensis MR-1 SO_0779 -296 5.5 ATGAGAAAATCTAAT
Shewanella putrefaciens CN-32 Sputcn32_3211 -152 5.5 ATGAGAAAATCTAAT
Shewanella sp W3-18-1 Sputw3181_0730 -152 5.5 ATGAGAAAATCTAAT
Shewanella sp ANA-3 Shewana3_3501 -296 5.5 ATGAGAAAATCTAAT
Shewanella sp MR-4 Shewmr4_3331 -298 5.5 ATGAGAAAATCTAAT
Shewanella sp MR-7 Shewmr7_0622 -297 5.5 ATGAGAAAATCTAAT
Shewanella baltica OS155 Sbal_0617 -348 5.5 ATGAGAAAATCTAAT
Shewanella denitrificans OS217 Sden_0833 -142 5.6 ATTAGTAAAACTAAT
Shewanella frigidimarina NCIMB 400 Sfri_3151 -131 5.2 ATTAGCTAAACTAAT
Shewanella amazonensis SB2B Sama_2721 -141 5.2 ATAAGAAAAACTAAT
Shewanella loihica PV-4 Shew_3064 -371 4.8 ATGAGAAAAAGTAAT
Shewanella pealeana ATCC 700345 Spea_3303 -233 5.4 ATGAGAAAAACTAAT
Shewanella halifaxensis HAW-EB4 Shal_3375 -213 5.4 ATGAGAAAAACTAAT
Shewanella piezotolerans WP3 swp_0913 -163 5.4 ATGAGAAAAACTAAT
Shewanella sediminis HAW-EB3 Ssed_3675 -213 4.8 ATGAGAAAAAGTAAT
Shewanella woodyi ATCC 51908 Swoo_3969 -229 4.8 ATGAGAAAAAGTAAT
Position: -112
Score: 4.1
Sequence: ATGTTTATAACTAAT
Locus tag: PE36_04648
PE36_04648 -112 4.1 ATGTTTATAACTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdaA
Ortholog function: L-serine dehydratase 1 (EC 4.3.1.17)
Shewanella oneidensis MR-1 SO_2248 -199 4.4 ATCAAAAAAACTAAT
Shewanella putrefaciens CN-32 Sputcn32_2171 -202 4.4 ATCAAAAAAACTAAT
Shewanella sp W3-18-1 Sputw3181_1837 -202 4.4 ATCAAAAAAACTAAT
Shewanella sp ANA-3 Shewana3_2295 -199 4.4 ATCAAAAAAACTAAT
Shewanella sp MR-4 Shewmr4_1725 -199 4.4 ATCAAAAAAACTAAT
Shewanella sp MR-7 Shewmr7_1804 -199 4.4 ATCAAAAAAACTAAT
Shewanella baltica OS155 Sbal_2417 -197 4.4 ATTTAAAAAACTAAT
Shewanella denitrificans OS217 Sden_1946 -208 5.2 ATAAGAAAAACTAAT
Shewanella frigidimarina NCIMB 400 Sfri_2402 -140 4.5 ATCAAAAAATCTAAT
Shewanella amazonensis SB2B Sama_1325 -189 4.6 ATAAAAATAACTAAT
Shewanella loihica PV-4 Shew_1625 -184 4.1 TTGAAAAAAACTAAT
Shewanella pealeana ATCC 700345 Spea_1538 -232 5.7 ATTAGATTATCTAAT
Shewanella halifaxensis HAW-EB4 Shal_1608 -244 5.3 ATTAGCTTATCTAAT
Shewanella piezotolerans WP3 swp_1748 -246 5.6 ATTAGTTTATCTAAT
Shewanella sediminis HAW-EB3 Ssed_2838 -187 4.8 ATTAAAAAATCTCAT
Shewanella woodyi ATCC 51908 Swoo_1806 -206 4.7 CTTAGCTTATCTAAT
-179 4.8 ATTAAAAAAACTCAT
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