Propagation of SoxR regulog to Alteromonadales bacterium TW-7
| Source regulog: | SoxR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Alteromonadales bacterium TW-7 |
| Orthologous TF(s) | ATW7_01922 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -57
Score: 7 Sequence: ACCTAAAGTTAACTTGAGGT
Locus tag: ATW7_14426
|
||||
| ATW7_14426 | -57 | 7 | ACCTAAAGTTAACTTGAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: PF00903 | ||||
| Ortholog function: Glyoxalase/bleomycin resistance protein/dioxygenase | ||||
| Shewanella denitrificans OS217 | Sden_2124 | -56 | 7.3 | ACCTCAAGCTAACTTGAGGT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1566 | -57 | 7 | ACCTCAAGTTAGCTTTAGGT |
|
Position: -40
Score: 6.3 Sequence: ACCTCAAGTTATATTGAGGT
Locus tag: ATW7_01922
|
||||
| ATW7_01922 | -40 | 6.3 | ACCTCAAGTTATATTGAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: soxR | ||||
| Ortholog function: Redox-sensitive transcriptional activator, MerR family | ||||
| Shewanella denitrificans OS217 | Sden_2125 | -116 | 7.3 | ACCTCAAGTTAGCTTGAGGT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1565 | -64 | 7 | ACCTAAAGCTAACTTGAGGT |
| Shewanella piezotolerans WP3 | swp_2307 | -49 | 6 | ATCTCAAGTTAACTTTAGAT |