Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NagR regulog to Alteromonadales bacterium TW-7

Reference regulog properties
Source regulog: NagR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonadales bacterium TW-7
Orthologous TF(s) ATW7_01295
Regulated genes 2
Built upon 105 sites [see more]
Predicted regulatory interactions in Alteromonadales bacterium TW-7
Locus tag Position Score Sequence
Position: -339
Score: 6.2
Sequence: CATGACAGCGTTGTCATT
Locus tag: ATW7_01295
ATW7_01295 -339 6.2 CATGACAGCGTTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagR
Ortholog function: Transcriptional regulator of N-acetylglucosamine utilization, LacI family
Shewanella sp ANA-3 Shewana3_3122 -96 5.1 GCTGACAACGCTGTCGGC
Shewanella sp MR-4 Shewmr4_2943 -96 5.1 GCTGACAACGCTGTCGGC
Shewanella sp MR-7 Shewmr7_3025 -96 5.1 GCTGACAACGCTGTCGGC
Shewanella denitrificans OS217 Sden_2709 -301 6.2 AATGACAACGCTGTCATG
Position: -103
Score: 6.4
Sequence: AATGACAACGCTGTCATT
Locus tag: ATW7_01315
ATW7_01315 -103 6.4 AATGACAACGCTGTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagK
Ortholog function: N-acetylglucosamine kinase of eukaryotic type (EC 2.7.1.59)
Shewanella oneidensis MR-1 SO_3507 -115 6.4 AATGACAACGCTGTCATT
Shewanella putrefaciens CN-32 Sputcn32_1076 -90 6.4 AATGACAACGCTGTCATC
Shewanella sp W3-18-1 Sputw3181_3089 -90 6.4 AATGACAACGCTGTCATC
Shewanella sp ANA-3 Shewana3_3114 -114 6.4 AATGACAACGCTGTCATT
Shewanella sp MR-4 Shewmr4_2935 -114 6.4 AATGACAACGCTGTCATT
Shewanella sp MR-7 Shewmr7_3017 -114 6.4 AATGACAACGCTGTCATT
Shewanella baltica OS155 Sbal_1084 -113 6.4 AATGACAACGCTGTCATT
Shewanella denitrificans OS217 Sden_2706 -101 6.4 AATGACAACGCTGTCATT
Shewanella amazonensis SB2B Sama_0944 -105 6.4 AATGACAACGCTGTCATT
Shewanella loihica PV-4 Shew_1116 -106 6.4 AATGACAGCGTTGTCATT
Shewanella pealeana ATCC 700345 Spea_1101 -123 6.4 AATGACAACGCTGTCATT
Shewanella halifaxensis HAW-EB4 Shal_1149 -124 6.4 AATGACAACGCTGTCATT
Shewanella piezotolerans WP3 swp_3703 -106 6.4 AATGACAACGCTGTCATT
Shewanella sediminis HAW-EB3 Ssed_1212 -106 6.4 AATGACAACGCTGTCATT
Shewanella woodyi ATCC 51908 Swoo_1312 -108 6.4 AATGACAACGCTGTCATT
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