Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of MalR regulog to Alteromonadales bacterium TW-7

Reference regulog properties
Source regulog: MalR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Maltodextrin utilization
Effector: Maltose
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonadales bacterium TW-7
Orthologous TF(s) ATW7_07389
Regulated genes 4
Built upon 67 sites [see more]
Predicted regulatory interactions in Alteromonadales bacterium TW-7
Locus tag Position Score Sequence
Position: -123
Score: 6.1
Sequence: TGTGCATACGTATGCAGT
Locus tag: ATW7_07444
ATW7_07444 -123 6.1 TGTGCATACGTATGCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malZ
Ortholog function: Maltodextrin glucosidase (EC 3.2.1.20)
Shewanella sp ANA-3 Shewana3_2311 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella sp MR-4 Shewmr4_2133 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella sp MR-7 Shewmr7_2209 -312 6.1 TGTGCATACGTATTCAAT
-163 6.2 TTTGCATACGTATGCAGG
Shewanella baltica OS155 Sbal_2287 -312 6 AGTGCATACGTATTCAAT
-163 6.2 TCTGCATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2028 -292 6.1 TATGCATACGTATTCAAT
-143 6.2 TTTGCATACGTATGCAGT
Shewanella frigidimarina NCIMB 400 Sfri_1788 -296 6 TATGCATACGTATTCAAC
-147 6.2 TTTGCATACGTATGCAGG
Shewanella amazonensis SB2B Sama_1662 -317 6.1 AGTGCATACGTATTCAAA
-167 6.1 TGTGCATACGTATGCAGC
Shewanella loihica PV-4 Shew_1889 -311 6.1 TATGCATACGTATTCAAA
-160 6.2 TTTGCATACGTATGCAGT
Shewanella piezotolerans WP3 swp_2670 -303 6.1 TATGCATACGTATTCAAT
-154 5.9 ATTACATACGTATGCAGA
Shewanella woodyi ATCC 51908 Swoo_2210 -198 6.1 TATGCATACGTATTCAAA
-47 6.2 TATGCATACGTATGCAGA
Position: -84
Score: 5.7
Sequence: AATGAATACGTATGTAGA
Locus tag: ATW7_17172
ATW7_17172 -84 5.7 AATGAATACGTATGTAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: susB
Ortholog function: Alpha-glucosidase (EC 3.2.1.20)
Shewanella oneidensis MR-1 SO_2450 -90 5.4 GTGGAATACGTATGCAAG
Shewanella sp ANA-3 Shewana3_1931 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-4 Shewmr4_1876 -90 6 GGTGAATACGTATGCAAA
Shewanella sp MR-7 Shewmr7_2102 -90 6 GGTGAATACGTATGCAAA
Shewanella baltica OS155 Sbal_2329 -90 5.9 GGTGAATACGTATGCAGG
Shewanella denitrificans OS217 Sden_2002 -100 5.7 CCTGAATACGTATGTAGT
Shewanella frigidimarina NCIMB 400 Sfri_1777 -92 6.1 ACTGAATACGTATGCAAA
Shewanella amazonensis SB2B Sama_1108 -89 6 GCTGAATACGTATGCAGC
Shewanella loihica PV-4 Shew_1876 -164 5.9 GGTGAATACGTATGCAGC
Shewanella piezotolerans WP3 swp_2676 -111 6.1 TTTGAATACGTATGCAAG
Position: -107
Score: 5.9
Sequence: ACTGCATACGTATTCATC
Locus tag: ATW7_17257
ATW7_17257 -107 5.9 ACTGCATACGTATTCATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: omp(Mal)2
Ortholog function: Predicted maltose-specific TonB-dependent receptor
Shewanella amazonensis SB2B Sama_0286 -140 6 TGTGAATACGTATGCATA
Shewanella piezotolerans WP3 swp_3412 -143 6 TATGAATACGTATGCAGC
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