Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GcvA regulog to Alteromonadales bacterium TW-7

Reference regulog properties
Source regulog: GcvA - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator (repressor)
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Alteromonadales bacterium TW-7
Orthologous TF(s) ATW7_06093
Regulated genes 1
Built upon 108 sites [see more]
Predicted regulatory interactions in Alteromonadales bacterium TW-7
Locus tag Position Score Sequence
Position: -31
Score: 5.2
Sequence: ATAAGAAAAACTAAT
Locus tag: ATW7_06093
ATW7_06093 -31 5.2 ATAAGAAAAACTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gcvA
Ortholog function: Glycine cleavage system transcriptional activator GcvA
Shewanella oneidensis MR-1 SO_1533 -38 5.6 ATTAGAAAAACTAAT
Shewanella putrefaciens CN-32 Sputcn32_1282 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp W3-18-1 Sputw3181_2824 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp ANA-3 Shewana3_2894 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp MR-4 Shewmr4_2724 -38 5.6 ATTAGAAAAACTAAT
Shewanella sp MR-7 Shewmr7_2795 -38 5.6 ATTAGAAAAACTAAT
Shewanella baltica OS155 Sbal_1364 -38 5.6 ATTAGAAAAACTAAT
Shewanella denitrificans OS217 Sden_2565 -54 5.2 ATTAGAAAAACTTAT
Shewanella frigidimarina NCIMB 400 Sfri_2783 -38 5.6 ATTAGAAAAACTAAT
Shewanella amazonensis SB2B Sama_2429 -38 5.6 ATTAGAAAAACTAAT
Shewanella loihica PV-4 Shew_2764 -38 5.6 ATTAGAAAAACTAAT
Shewanella pealeana ATCC 700345 Spea_2984 -38 5.6 ATTAGAAAAACTAAT
Shewanella halifaxensis HAW-EB4 Shal_3073 -38 5.6 ATTAGAAAAACTAAT
Shewanella piezotolerans WP3 swp_3612 -38 5.6 ATTAGAAAAACTAAT
Shewanella sediminis HAW-EB3 Ssed_3322 -38 5.6 ATTAGAAAAACTAAT
Shewanella woodyi ATCC 51908 Swoo_3471 -38 5.6 ATTAGAAAAACTAAT