Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ribBA gene

Properties
Regulog: RbkR - Thermococcales
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Euryarchaeota
Built upon 13 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pyrococcus furiosus DSM 3638
Position: -56
Score: 4.92515
Sequence: CTGTCTTATTTTTGGAACAC
Position: -23
Score: 4.56364
Sequence: TAGTTCTATACTTGAGACAT
Locus tag: PF0064
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: PF0063
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
Locus tag: PF0062
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: PF0061
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
ribBA-ribH-ribD-ribE -56 4.9 CTGTCTTATTTTTGGAACAC PF0064
-23 4.6 TAGTTCTATACTTGAGACAT
Thermococcus gammatolerans EJ3
Position: 92
Score: 6.00711
Sequence: ATGTTCCAAAAACGGAACAA
Locus tag: TGAM_1254
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: TGAM_1255
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: TGAM_1256
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: TGAM_1257
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH 92 6 ATGTTCCAAAAACGGAACAA TGAM_1254
Thermococcus kodakaraensis KOD1
Position: -62
Score: 5.81594
Sequence: TGATTCCATTTTTGGAACAA
Position: -40
Score: 4.56159
Sequence: TTTTTAAAAATTTAGAACAT
Locus tag: TK0428
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: TK0429
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribBA-ribH -62 5.8 TGATTCCATTTTTGGAACAA TK0428
-40 4.6 TTTTTAAAAATTTAGAACAT
Thermococcus onnurineus NA1
Position: -53
Score: 6.34218
Sequence: TTATTCCAATTTTGGAACAA
Locus tag: TON_0610
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: TON_0609
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: TON_0608
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: TON_0607
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -53 6.3 TTATTCCAATTTTGGAACAA TON_0610