Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF08888 gene

Properties
Regulog: PhrR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Light-dependent DNA repair
Effector: Blue light; Adenosylcobalamin
Phylum: Proteobacteria/Gamma
Built upon 43 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -78
Score: 4.40369
Sequence: TGTACAAAGCGGGACACTGCTATA
Locus tag: Avin_10270
Name: folM
Funciton: FolM Alternative dihydrofolate reductase 1
Locus tag: Avin_10260
Name: folB
Funciton: Dihydroneopterin triphosphate epimerase
Locus tag: Avin_10250
Name: PF06844
Funciton: protein of unknown function DUF1244
Locus tag: Avin_10240
Name: PF08888
Funciton: HopJ type III effector protein
folM-folB-PF06844-PF08888 -78 4.4 TGTACAAAGCGGGACACTGCTATA Avin_10270
Pseudomonas mendocina ymp
Position: -251
Score: 5.58199
Sequence: TGTACAAAACACATGGATCGTACA
Position: -118
Score: 4.56068
Sequence: TGTACAACCCGCAGCTCTGGTATA
Locus tag: Pmen_3288
Name: folM
Funciton: FolM Alternative dihydrofolate reductase 1
Locus tag: Pmen_3289
Name: folE
Funciton: GTP cyclohydrolase I (EC 3.5.4.16) type 1
Locus tag: Pmen_3290
Name: folB
Funciton: Dihydroneopterin triphosphate epimerase
Locus tag: Pmen_3291
Name: PF06844
Funciton: protein of unknown function DUF1244
Locus tag: Pmen_3292
Name: PF08888
Funciton: HopJ type III effector protein
folM-folE-folB-PF06844-PF08888 -251 5.6 TGTACAAAACACATGGATCGTACA Pmen_3288
-118 4.6 TGTACAACCCGCAGCTCTGGTATA
Pseudomonas syringae pv. tomato str. DC3000
Position: -101
Score: 6.0939
Sequence: TGTACAAAAAAATTCTCTGGTATA
Locus tag: PSPTO1183
Name: folM
Funciton: FolM Alternative dihydrofolate reductase 1
Locus tag: PSPTO1182
Name: folE
Funciton: GTP cyclohydrolase I (EC 3.5.4.16) type 1
Locus tag: PSPTO1181
Name: folB
Funciton: Dihydroneopterin triphosphate epimerase
Locus tag: PSPTO1180
Name: PF06844
Funciton: protein of unknown function DUF1244
Locus tag: PSPTO1179
Name: PF08888
Funciton: HopJ type III effector protein
folM-folE-folB-PF06844-PF08888 -101 6.1 TGTACAAAAAAATTCTCTGGTATA PSPTO1183