Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rarA gene

Properties
Regulog: LexA - Bifidobacteriaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Built upon 97 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bifidobacterium adolescentis ATCC 15703
Position: -48
Score: 5.75759
Sequence: TCGAACGTGTGTTCGA
Locus tag: BAD_0585
Name: rarA
Funciton: Recombination factor protein RarA
rarA -48 5.8 TCGAACGTGTGTTCGA BAD_0585
Bifidobacterium animalis subsp. lactis AD011
Position: -56
Score: 6.1123
Sequence: TCGAACATTTGTTCGA
Locus tag: BLA_1204
Name: rarA
Funciton: Recombination factor protein RarA
rarA -56 6.1 TCGAACATTTGTTCGA BLA_1204
Bifidobacterium bifidum NCIMB 41171
Position: -38
Score: 5.61771
Sequence: TCGAACCTATGTTCGA
Locus tag: BbifN4_010100002924
Name: rarA
Funciton: Recombination factor protein RarA
rarA -38 5.6 TCGAACCTATGTTCGA BbifN4_010100002924
Bifidobacterium breve DSM 20213
Position: -39
Score: 5.87419
Sequence: TCGAACGTCTGTTCGA
Locus tag: BIFBRE_00563
Name: rarA
Funciton: Recombination factor protein RarA
rarA -39 5.9 TCGAACGTCTGTTCGA BIFBRE_00563
Bifidobacterium dentium Bd1
Position: -21
Score: 5.75759
Sequence: TCGAACGTGTGTTCGA
Locus tag: BDP_0795
Name: rarA
Funciton: Recombination factor protein RarA
rarA -21 5.8 TCGAACGTGTGTTCGA BDP_0795
Bifidobacterium gallicum DSM 20093
Position: -68
Score: 6.2832
Sequence: TCGAACATATGTTCGA
Locus tag: BIFGAL_01848
Name: rarA
Funciton: Recombination factor protein RarA
rarA -68 6.3 TCGAACATATGTTCGA BIFGAL_01848
Bifidobacterium longum NCC2705
Position: -39
Score: 5.87419
Sequence: TCGAACGTCTGTTCGA
Locus tag: BL0029
Name: rarA
Funciton: Recombination factor protein RarA
rarA -39 5.9 TCGAACGTCTGTTCGA BL0029
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -39
Score: 5.87419
Sequence: TCGAACGTCTGTTCGA
Locus tag: Blon_0716
Name: rarA
Funciton: Recombination factor protein RarA
rarA -39 5.9 TCGAACGTCTGTTCGA Blon_0716
Gardnerella vaginalis 409-05
Position: -38
Score: 5.56614
Sequence: TCGAACGTTTGTTCTA
Locus tag: HMPREF0424_0826
Name: rarA
Funciton: Recombination factor protein RarA
rarA -38 5.6 TCGAACGTTTGTTCTA HMPREF0424_0826