Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ruvB gene

Properties
Regulog: LexA - Bifidobacteriaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Actinobacteria
Built upon 97 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bifidobacterium adolescentis ATCC 15703
Position: -41
Score: 5.88623
Sequence: TCGAACAGATGTTCTA
Locus tag: BAD_0804
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BAD_0805
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -41 5.9 TCGAACAGATGTTCTA BAD_0804
Bifidobacterium angulatum DSM 20098
Position: -29
Score: 5.9824
Sequence: TCGAACAGTTGTTCGA
Locus tag: BIFANG_01367
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BIFANG_01366
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -29 6 TCGAACAGTTGTTCGA BIFANG_01367
Bifidobacterium animalis subsp. lactis AD011
Position: -33
Score: 5.80388
Sequence: CCGAACATATGTTCGA
Locus tag: BLA_1342
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BLA_1341
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -33 5.8 CCGAACATATGTTCGA BLA_1342
Bifidobacterium bifidum NCIMB 41171
Position: -169
Score: 5.40691
Sequence: TCGAACAGATGTTCTG
Locus tag: BbifN4_010100004709
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BbifN4_010100004704
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -169 5.4 TCGAACAGATGTTCTG BbifN4_010100004709
Bifidobacterium breve DSM 20213
Position: -36
Score: 5.9824
Sequence: TCGAACAGTTGTTCGA
Locus tag: BIFBRE_01347
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BIFBRE_01348
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -36 6 TCGAACAGTTGTTCGA BIFBRE_01347
Bifidobacterium dentium Bd1
Position: -151
Score: 5.88623
Sequence: TCGAACAGATGTTCTA
Locus tag: BDP_1176
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BDP_1175
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -151 5.9 TCGAACAGATGTTCTA BDP_1176
Bifidobacterium gallicum DSM 20093
Position: -125
Score: 5.7735
Sequence: GCGAACATCTGTTCGA
Locus tag: BIFGAL_01661
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BIFGAL_01660
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -125 5.8 GCGAACATCTGTTCGA BIFGAL_01661
Bifidobacterium longum NCC2705
Position: -50
Score: 5.9824
Sequence: TCGAACAGTTGTTCGA
Locus tag: BL0728
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: BL0729
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -50 6 TCGAACAGTTGTTCGA BL0728
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -50
Score: 6.15329
Sequence: TCGAACAGATGTTCGA
Locus tag: Blon_1157
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: Blon_1158
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -50 6.2 TCGAACAGATGTTCGA Blon_1157
Gardnerella vaginalis 409-05
Position: -79
Score: 5.61917
Sequence: TAGAACAGATGTTCTA
Locus tag: HMPREF0424_0837
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: HMPREF0424_0836
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -79 5.6 TAGAACAGATGTTCTA HMPREF0424_0837