Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing lnbA gene

Properties
Regulog: NagR - Bifidobacteriaceae
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode:
Biological process: Lacto-N-biose utilization; Galacto-N-biose utilization
Effector: N-acetylglucosamine-6-phosphate
Phylum: Actinobacteria
Built upon 28 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bifidobacterium bifidum NCIMB 41171
Position: -101
Score: 4.71854
Sequence: AAATGTTAATGTAGTTGACATTT
Locus tag: BbifN4_010100004949
Name: lnbA
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: BbifN4_010100004944
Name: lnbB
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: BbifN4_010100004939
Name: lnbC
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
lnbA-lnbB-lnbC -101 4.7 AAATGTTAATGTAGTTGACATTT BbifN4_010100004949
Bifidobacterium breve DSM 20213
Position: -184
Score: 4.5779
Sequence: CTTTGTAAGGAGTATTAATAAAA
Position: -96
Score: 5.201
Sequence: AATTGTTAGTTAGGTTGACAATA
Locus tag: BIFBRE_00332
Name: lnbA
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: BIFBRE_00333
Name: lnbB
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: BIFBRE_00334
Name: lnbC
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
Locus tag: BIFBRE_00335
Name: lnpA
Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
lnbA-lnbB-lnbC-lnpA -184 4.6 CTTTGTAAGGAGTATTAATAAAA BIFBRE_00332
-96 5.2 AATTGTTAGTTAGGTTGACAATA
Bifidobacterium longum NCC2705
Position: -95
Score: 5.175
Sequence: AATTGTTAGCTAAGTTGACAATA
Locus tag: BL1638
Name: lnbA
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: BL1639
Name: lnbB
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: BL1640
Name: lnbC
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
Locus tag: BL1641
Name: lnpA
Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
Locus tag: BL1642
Name: nahK
Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162)
Locus tag: BL1643
Name: galT2
Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Locus tag: BL1644
Name: galE2
Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
lnbA-lnbB-lnbC-lnpA-nahK-galT2-galE2 -95 5.2 AATTGTTAGCTAAGTTGACAATA BL1638
Bifidobacterium longum subsp. infantis ATCC 15697
Position: -175
Score: 3.99586
Sequence: GTGAGTTAATGAAATGAACAAAC
Position: -95
Score: 4.94539
Sequence: AATTGTTAGTTGGGTTGACAATA
Position: -31
Score: 4.11728
Sequence: TTTTGATGATCAACCTCACAAAG
Locus tag: Blon_2177
Name: lnbA
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, substrate-binding protein
Locus tag: Blon_2176
Name: lnbB
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 1
Locus tag: Blon_2175
Name: lnbC
Funciton: Predicted galacto-N-biose-/lacto-N-biose ABC transporter, permease component 2
Locus tag: Blon_2174
Name: lnpA
Funciton: 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC:2.4.1.211)
Locus tag: Blon_2173
Name: nahK
Funciton: N-acetylhexosamine 1-kinase (EC:2.7.1.162)
Locus tag: Blon_2172
Name: galT2
Funciton: UDP-glucose--hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Locus tag: Blon_2171
Name: galE2
Funciton: UDP-glucose 4-epimerase (EC 5.1.3.2)
lnbA-lnbB-lnbC-lnpA-nahK-galT2-galE2 -175 4 GTGAGTTAATGAAATGAACAAAC Blon_2177
-95 4.9 AATTGTTAGTTGGGTTGACAATA
-31 4.1 TTTTGATGATCAACCTCACAAAG