Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xosB gene

Properties
Regulog: XosR - Bifidobacteriaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Xylooligosacharides utilization
Effector:
Phylum: Actinobacteria
Built upon 19 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bifidobacterium adolescentis ATCC 15703
Position: -298
Score: 5.65185
Sequence: CGAACGAAAGTTTCGGTTT
Position: -275
Score: 5.67488
Sequence: TTTTCGAAACTTTCGATAT
Position: -141
Score: 5.39297
Sequence: AAATGGAAATTTTCGAAGG
Locus tag: BAD_0425
Name: xosA
Funciton: Xylooligosacharides ABC transporter, substrate binding protein
Locus tag: BAD_0426
Name: xosB
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BAD_0427
Name: xosC
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BAD_0428
Name: xynB
Funciton: Beta-xylosidase (EC 3.2.1.37)
Locus tag: BAD_0429
Name: PF03629
Funciton: protein of unknown function DUF303, acetylesterase putative
xosA-xosB-xosC-xynB-PF03629 -298 5.7 CGAACGAAAGTTTCGGTTT BAD_0425
-275 5.7 TTTTCGAAACTTTCGATAT
-141 5.4 AAATGGAAATTTTCGAAGG
Bifidobacterium angulatum DSM 20098
Position: -318
Score: 5.65185
Sequence: CGAACGAAAGTTTCGGTTT
Position: -295
Score: 5.67488
Sequence: TTTTCGAAACTTTCGATAT
Position: -161
Score: 5.39297
Sequence: AAATGGAAATTTTCGAAGG
Locus tag: BIFANG_00032
Name: xosA
Funciton: Xylooligosacharides ABC transporter, substrate binding protein
Locus tag: BIFANG_00031
Name: xosB
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BIFANG_00030
Name: xosC
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BIFANG_00029
Name: xynB
Funciton: Beta-xylosidase (EC 3.2.1.37)
Locus tag: BIFANG_00028
Name: PF03629
Funciton: protein of unknown function DUF303, acetylesterase putative
xosA-xosB-xosC-xynB-PF03629 -318 5.7 CGAACGAAAGTTTCGGTTT BIFANG_00032
-295 5.7 TTTTCGAAACTTTCGATAT
-161 5.4 AAATGGAAATTTTCGAAGG
Bifidobacterium dentium Bd1
Position: -329
Score: 5.73228
Sequence: AGAGCGAAAGTTTCGAATT
Position: -306
Score: 5.73456
Sequence: ATTTCGAAACTTTCGGATT
Position: -65
Score: 5.3333
Sequence: CTTTCGAAGCTTTCGTTCT
Locus tag: BDP_0565
Name: xosA
Funciton: Xylooligosacharides ABC transporter, substrate binding protein
Locus tag: BDP_0566
Name: xosB
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BDP_0567
Name: xosC
Funciton: Xylooligosacharides ABC transporter, permease protein 2
Locus tag: BDP_0568
Name: xynB
Funciton: Beta-xylosidase (EC 3.2.1.37)
xosA-xosB-xosC-xynB -329 5.7 AGAGCGAAAGTTTCGAATT BDP_0565
-306 5.7 ATTTCGAAACTTTCGGATT
-65 5.3 CTTTCGAAGCTTTCGTTCT