Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG438 (RfaG) gene

Properties
Regulog: YrdX - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Beta
Built upon 11 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Polaromonas naphthalenivorans CJ2
Position: -324
Score: 6.59385
Sequence: CTTGATTG-(5)-CTTGATTG
Position: -320
Score: 5.06978
Sequence: ATTGCATG-(5)-ATTGCATT
Position: -224
Score: 6.12774
Sequence: GTTTATCG-(5)-ATTGATTG
Position: -105
Score: 6.59385
Sequence: ATTGATTG-(3)-CTTGATTG
Locus tag: Pnap_2105
Name: PF02635
Funciton: probable GTP cyclohydrolase II/ATPase/Sulphur relay, DsrE/F-like protein
Locus tag: Pnap_2104
Name: COG388
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (EC 3.5.5.7)
Locus tag: Pnap_2103
Name: COG2516
Funciton: Biotin synthase-related radical SAM domain protein
Locus tag: Pnap_2102
Name: COG3153
Funciton: GCN5-related N-acetyltransferase
Locus tag: Pnap_2101
Name: COG2144
Funciton: AIR synthase related protein/Selenophosphate synthetase-related
Locus tag: Pnap_2100
Name: COG438 (RfaG)
Funciton: Glycosyltransferase
PF02635-COG388-COG2516-COG3153-COG2144-COG438 (RfaG) -324 6.6 CTTGATTG-(5)-CTTGATTG Pnap_2105
-320 5.1 ATTGCATG-(5)-ATTGCATT
-224 6.1 GTTTATCG-(5)-ATTGATTG
-105 6.6 ATTGATTG-(3)-CTTGATTG
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