Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1413 gene

Properties
Regulog: SO1415 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Proteobacteria/gamma
Built upon 18 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -119
Score: 6.68176
Sequence: ATTCGAGAGCTGCCTCACGAAT
Locus tag: Shal_3966
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: Shal_3967
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: Shal_3968
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: Shal_3969
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414-SO1413-SO1412-SO1411 -119 6.7 ATTCGAGAGCTGCCTCACGAAT Shal_3966
Shewanella loihica PV-4
Position: -118
Score: 6.27259
Sequence: ATTCGGGACATGGTTCACGAAT
Locus tag: Shew_0276
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: Shew_0275
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: Shew_0274
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: Shew_0273
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414-SO1413-SO1412-SO1411 -118 6.3 ATTCGGGACATGGTTCACGAAT Shew_0276
Shewanella oneidensis MR-1
Position: -117
Score: 6.70644
Sequence: ATTCAAGAGACGTCTCACGAAT
Locus tag: SO_1414
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: SO_1413
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: SO_1412
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: SO_1411
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414-SO1413-SO1412-SO1411 -117 6.7 ATTCAAGAGACGTCTCACGAAT SO_1414
Shewanella pealeana ATCC 700345
Position: -119
Score: 6.77856
Sequence: ATTCGAGAGCTGACTCACGAAT
Locus tag: Spea_0325
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: Spea_0324
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: Spea_0323
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: Spea_0322
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414-SO1413-SO1412-SO1411 -119 6.8 ATTCGAGAGCTGACTCACGAAT Spea_0325
Shewanella sediminis HAW-EB3
Position: -116
Score: 5.87748
Sequence: CTTCGAGATCTGCTTCACGAAT
Locus tag: Ssed_4184
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: Ssed_4185
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: Ssed_4186
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: Ssed_4187
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414-SO1413-SO1412-SO1411 -116 5.9 CTTCGAGATCTGCTTCACGAAT Ssed_4184
Shewanella sp MR-4
Position: -116
Score: 6.43543
Sequence: ATTCACGAGATAACTCACGAAT
Locus tag: Shewmr4_0299
Name: SO1414
Funciton: Flavocytochrome c flavin subunit
Locus tag: Shewmr4_0300
Name: SO1413
Funciton: Flavocytochrome c heme subunit
Locus tag: Shewmr4_0301
Name: SO1412
Funciton: outer membrane beta barrel protein
Locus tag: Shewmr4_0302
Name: SO1411
Funciton: conserved hypothetical outer membrane protein
SO1414-SO1413-SO1412-SO1411 -116 6.4 ATTCACGAGATAACTCACGAAT Shewmr4_0299