Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rbsR gene

Properties
Regulog: RbsR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Proteobacteria/gamma
Built upon 4 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -113
Score: 6.20481
Sequence: ATATCGAAACGTTTCGATTA
Position: -80
Score: 6.34657
Sequence: TTATCGAAACGTTTCGATCG
Locus tag: Shal_0578
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Shal_0579
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Shal_0580
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Shal_0581
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Shal_0582
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Shal_0583
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -113 6.2 ATATCGAAACGTTTCGATTA Shal_0578
-80 6.3 TTATCGAAACGTTTCGATCG
Shewanella pealeana ATCC 700345
Position: -126
Score: 6.20481
Sequence: ATATCGAAACGTTTCGATTA
Position: -93
Score: 6.34657
Sequence: TTATCGAAACGTTTCGATCG
Locus tag: Spea_0514
Name: rbsD
Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Spea_0515
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Spea_0516
Name: rbsC
Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Spea_0517
Name: rbsB
Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Spea_0518
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Spea_0519
Name: rbsR
Funciton: Transcriptional repressor of ribose utilization, LacI family
rbsD-rbsA-rbsC-rbsB-rbsK-rbsR -126 6.2 ATATCGAAACGTTTCGATTA Spea_0514
-93 6.3 TTATCGAAACGTTTCGATCG