Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG0348 gene

Properties
Regulog: YdcR - Vibrionales
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Built upon 12 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -145
Score: 5.49994
Sequence: CCTTGTTAGAGTAAT-(9)-GACTGTTATATAATC
Locus tag: PBPRA3588
Name: COG0348
Funciton: Polyferredoxin
COG0348 -145 5.5 CCTTGTTAGAGTAAT-(9)-GACTGTTATATAATC PBPRA3588
Vibrio harveyi ATCC BAA-1116
Position: -228
Score: 7.27834
Sequence: AACTGTTCAGTCATT-(9)-AACTGTACTGACTTT
Locus tag: VIBHAR_00402
Name: COG0348
Funciton: Polyferredoxin
COG0348 -228 7.3 AACTGTTCAGTCATT-(9)-AACTGTACTGACTTT VIBHAR_00402
Vibrio parahaemolyticus RIMD 2210633
Position: -155
Score: 6.7491
Sequence: AACTGTTCAGCCGTT-(9)-AACTGTACTGACTTT
Locus tag: VP3052
Name: COG0348
Funciton: Polyferredoxin
COG0348 -155 6.7 AACTGTTCAGCCGTT-(9)-AACTGTACTGACTTT VP3052
Vibrio splendidus LGP32
Position: -246
Score: 7.0899
Sequence: TTCTGTTCGCTATTT-(9)-AACTGTTATGACTTT
Locus tag: VS_3138
Name: COG0348
Funciton: Polyferredoxin
COG0348 -246 7.1 TTCTGTTCGCTATTT-(9)-AACTGTTATGACTTT VS_3138
Vibrio vulnificus CMCP6
Position: -224
Score: 5.72589
Sequence: CACTGTTCAGCGAAA-(9)-AATTGTCCTGCTTTT
Locus tag: VV1_1038
Name: COG0348
Funciton: Polyferredoxin
COG0348 -224 5.7 CACTGTTCAGCGAAA-(9)-AATTGTCCTGCTTTT VV1_1038
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